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  1. Short report

    Cross feeding of glucose metabolism byproducts of Escherichia coli human gut isolates and probiotic strains affect survival of Vibrio cholerae

    Vibrio cholerae converts glucose into either acid or the neutral end product acetoin and its survival in carbohydrate enriched media is linked to the nature of the byproducts produced. It...

    Chirantana Sengupta, Manjula Ekka, Saurabh Arora, Prashant D. Dhaware, Rukhsana Chowdhury and Saumya Raychaudhuri

    Gut Pathogens 2017 9:3

    Published on: 17 January 2017

  2. Research

    Mycobacterium avium subsp. paratuberculosis and associated risk factors for inflammatory bowel disease in Iranian patients

    Inflammatory bowel disease (IBD) is described as a relapsing condition with high morbidity and uncertain complex pathogenesis. The association of Mycobacterium avium ssp. paratuberculosis (MAP) with Crohn’s disea...

    Samin Zamani, Mohammad Reza Zali, Hamid Asadzadeh Aghdaei, Leonardo Antonio Sechi, Magdalena Niegowska, Elisa Caggiu, Rouhollah Keshavarz, Nader Mosavari and Mohammad Mehdi Feizabadi

    Gut Pathogens 2017 9:1

    Published on: 3 January 2017

  3. Research

    Impacts of resistant starch and wheat bran consumption on enteric inflammation in relation to colonic bacterial community structures and short-chain fatty acid concentrations in mice

    Identifying the connection among diet, the intestinal microbiome, and host health is currently an area of intensive research, but the potential of dietary fiber (DF) consumption to ameliorate intestinal infla...

    Janelle A. Jiminez, Trina C. Uwiera, D. Wade Abbott, Richard R. E. Uwiera and G. Douglas Inglis

    Gut Pathogens 2016 8:67

    Published on: 22 December 2016

  4. Short report

    Effects of Escherichia coli Nissle 1917 and Ciprofloxacin on small intestinal epithelial cell mRNA expression in the neonatal piglet model of human rotavirus infection

    We evaluated the effects of the probiotic Escherichia coli Nissle 1917 (EcN) and the antibiotic Ciprofloxacin (Cipro) on mRNA expression of intestinal epithelial cells (IEC) in gnotobiotic (Gn) piglets colonized ...

    Francine C. Paim, Stephanie N. Langel, David D. Fischer, Sukumar Kandasamy, Lulu Shao, Moyasar A. Alhamo, Huang-Chi Huang, Anand Kumar, Gireesh Rajashekara, Linda J. Saif and Anastasia N. Vlasova

    Gut Pathogens 2016 8:66

    Published on: 13 December 2016

  5. Research

    Clostridium difficile colonization and antibiotics response in PolyFermS continuous model mimicking elderly intestinal fermentation

    Clostridium difficile (CD), a spore-forming and toxin-producing bacterium, is the main cause for antibiotic-associated diarrhea in the elderly. Here we investigated CD colonization in ...

    Sophie Fehlbaum, Christophe Chassard, Sophie Annick Poeker, Muriel Derrien, Candice Fourmestraux and Christophe Lacroix

    Gut Pathogens 2016 8:63

    Published on: 1 December 2016

  6. Genome Report

    Genome sequence of a commensal bacterium, Enterococcus faecalis CBA7120, isolated from a Korean fecal sample

    Enterococcus faecalis, the type strain of the genus Enterococcus, is not only a commensal bacterium in the gastrointestinal tract in vertebrates and invertebrates, but also causes seri...

    Joon Yong Kim, Hye Seon Song, Yeon Bee Kim, Joseph Kwon, Jong-Soon Choi, Yong-Joon Cho, Byung-Yong Kim, Jin-Kyu Rhee, Jinjong Myoung, Young-Do Nam and Seong Woon Roh

    Gut Pathogens 2016 8:62

    Published on: 25 November 2016

  7. Research

    Effect of antibiotic pre-treatment and pathogen challenge on the intestinal microbiota in mice

    More than 50 years after the discovery of antibiotics, bacterial infections have decreased substantially; however, antibiotics also may have negative effects such as increasing susceptibility to pathogens. An ...

    Tadasu Iizumi, Takako Taniguchi, Wataru Yamazaki, Geraldine Vilmen, Alexander V. Alekseyenko, Zhan Gao, Guillermo I. Perez Perez and Martin J. Blaser

    Gut Pathogens 2016 8:60

    Published on: 18 November 2016

  8. Genome Report

    Complete genome of Vibrio parahaemolyticus FORC014 isolated from the toothfish

    Foodborne illness can occur due to various pathogenic bacteria such as Staphylococcus aureus, Escherichia coli and Vibrio parahaemolyticus, and can cause severe gastroenteritis symptoms. In this study, we complet...

    Sojin Ahn, Han Young Chung, Sooyeon Lim, Kwondo Kim, Suyeon Kim, Eun Jung Na, Kelsey Caetano-Anolles, Ju-Hoon Lee, Sangryeol Ryu, Sang Ho Choi and Heebal Kim

    Gut Pathogens 2016 8:59

    Published on: 17 November 2016

  9. Research

    Case–control study of diarrheal disease etiology in individuals over 5 years in southwest China

    Acute diarrhea is one of the major public health problems worldwide. Most of studies on acute diarrhea have been made on infants aged below 5 years and few efforts have been made to identify the etiological ag...

    Shun-Xian Zhang, Chun-Li Yang, Wen-Peng Gu, Lin Ai, Emmanuel Serrano, Pin Yang, Xia Zhou, Shi-Zhu Li, Shan Lv, Zhi-Sheng Dang, Jun-Hu Chen, Wei Hu, Li-Guang Tian, Jia-Xu Chen and Xiao-Nong Zhou

    Gut Pathogens 2016 8:58

    Published on: 16 November 2016

  10. Genome Report

    Whole-genome sequencing and comparative genomic analysis of Escherichia coli O91 strains isolated from symptomatic and asymptomatic human carriers

    The Shiga toxin–producing Escherichia coli (STEC) O91:H21 strains NCCP15736 and NCCP15737 were isolated during a single outbreak in Korea, NCCP15736 from a symptomatic carrier and NCCP15737 from an asymptomatic c...

    Taesoo Kwon, Young-Seok Bak, Young-Hee Jung, Young-Bin Yu, Jong Tae Choi, Cheorl-Ho Kim, Jung-Beom Kim, Won Kim and Seung-Hak Cho

    Gut Pathogens 2016 8:57

    Published on: 11 November 2016

  11. Research

    Differences in host breed and diet influence colonization by Campylobacter jejuni and induction of local immune responses in chicken

    Chickens are regarded as the main reservoir for human campylobacteriosis. Little is known about the interaction between Campylobacter jejuni (C. jejuni) and chickens. This interaction may be influenced by the sta...

    Zifeng Han, Thomas Willer, Colin Pielsticker, Lenka Gerzova, Ivan Rychlik and Silke Rautenschlein

    Gut Pathogens 2016 8:56

    Published on: 10 November 2016

  12. Genome Report

    Genome sequencing, assembly, annotation and analysis of Staphylococcus xylosus strain DMB3-Bh1 reveals genes responsible for pathogenicity

    Staphylococcus xylosus is coagulase-negative staphylococci (CNS), found occasionally on the skin of humans but recurrently on other mammals. Recent reports suggest that this commensal ...

    Gurwinder Kaur, Amit Arora, Sathyaseelan Sathyabama, Nida Mubin, Sheenam Verma, Shanmugam Mayilraj and Javed N. Agrewala

    Gut Pathogens 2016 8:55

    Published on: 8 November 2016

  13. Research

    Modeling human enteric dysbiosis and rotavirus immunity in gnotobiotic pigs

    Rotavirus vaccines have poor efficacy in infants from low- and middle-income countries. Gut microbiota is thought to influence the immune response to oral vaccines. Thus, we developed a gnotobiotic (Gn) pig mo...

    Erica L. Twitchell, Christine Tin, Ke Wen, Husen Zhang, Sylvia Becker-Dreps, M. Andrea Azcarate-Peril, Samuel Vilchez, Guohua Li, Ashwin Ramesh, Mariah Weiss, Shaohua Lei, Tammy Bui, Xingdong Yang, Stacey Schultz-Cherry and Lijuan Yuan

    Gut Pathogens 2016 8:51

    Published on: 8 November 2016

  14. Research

    Differences in amino acid frequency in CagA and VacA sequences of Helicobacter pylori distinguish gastric cancer from gastric MALT lymphoma

    Helicobacter pylori is a pathogenic bacterium that causes various gastrointestinal diseases. The most common gastric malignancies associated with H. pylori are gastric cancer and lymph...

    Masahiko Hashinaga, Rumiko Suzuki, Junko Akada, Takashi Matsumoto, Yasutoshi Kido, Tadayoshi Okimoto, Masaaki Kodama, Kazunari Murakami and Yoshio Yamaoka

    Gut Pathogens 2016 8:54

    Published on: 8 November 2016

  15. Research

    Use of molecular typing to investigate bacterial translocation from the intestinal tract of chlorpyrifos-exposed rats

    Human are confronted on a daily basis with contaminant pesticide residues in food, water and other components of the environment. Although the digestive system is the first organ to come into contact with food...

    Claire Joly Condette, Bertin Elion Dzon, Farida Hamdad, Maurice Biendo, Véronique Bach and Hafida Khorsi-Cauet

    Gut Pathogens 2016 8:50

    Published on: 5 November 2016

  16. Letter to the Editor

    The novel norovirus genotype GII.17 is the predominant strain in diarrheal patients in Shanghai, China

    In the winter of 2014–2015, a novel norovirus (NoV) strain (GII.17) was reported to be the major cause of gastroenteritis outbreaks in East Asia. To determine the time course of gastroenteritis infections asso...

    Lifeng Pan, Caoyi Xue, Huiqin Fu, Dan Liu, Linying Zhu, Chang Cui, Weiping Zhu, Yifei Fu and Sun Qiao

    Gut Pathogens 2016 8:49

    Published on: 26 October 2016

  17. Research

    Molecular epidemiology, virulence determinants and antimicrobial resistance of Campylobacter spreading in retail chicken meat in Central China

    Campylobacter species are the major food-borne pathogens which could cause bacterial gastroenteritis in humans. Contaminated chicken products have been recognized as the primary vehicl...

    Tengfei Zhang, Qingping Luo, Yiluo Chen, Tingting Li, Guoyuan Wen, Rongrong Zhang, Ling Luo, Qin Lu, Diyun Ai, Hongcai Wang and Huabin Shao

    Gut Pathogens 2016 8:48

    Published on: 26 October 2016

  18. Genome Report

    Whole genome sequencing uncovers a novel IND-16 metallo-β-lactamase from an extensively drug-resistant Chryseobacterium indologenes strain J31

    Chryseobacterium indologenes is an emerging opportunistic pathogen in hospital-acquired infection, which is intrinsically resistant to most antimicrobial agents against gram-negative b...

    Tingting Wang, Xiawei Jiang, Chunyan Feng, Ang Li, Huihui Dong, Shaoqiang Wu and Beiwen Zheng

    Gut Pathogens 2016 8:47

    Published on: 21 October 2016

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