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Table 2 Statistics of the branches-sites positive selection analysis

From: Positive selection on a bacterial oncoprotein associated with gastric cancer

Lineage on tree 2 l Residues predicted to be under
positive selection (p < 0.05)
Venezuela 48.82 794, 834, 837
Vietnam 288.56 202, 274, 275, 277, 278, 279, 281, 282, 283, 287, 461, 834, 895, 896, 899, 900, 901, 903, 905, 908, 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922
Sweden 25.6 1008
Peru1 66.2 665, 799, 803
Peru2 3.24 186, 198, 667, 808
Ancestral lineage of Amerindian strains 30 650
Ancestral lineage of Asian strains 21.8 -
Africa(USA) 11.42 -
Italy 9.52 -
  1. Lineages predicted to be under positive selection were identified using the branches-sites test. Residues were identified using the Bayes Empirical Bayes statistic [43], only those that were statistically significant are displayed. Numbering is based on each respective sequence.