Table 3 Properties of EAEC and DAEC strains used for IS3 profiling in this study
Strain | Serotype (where known) | Country of isolation | MLST-defined ST | ST complex | Adherence pattern | Virulence genes | CVD 432 | orf1600 (z2240) |
|---|---|---|---|---|---|---|---|---|
NA H191-1 | Â | Peru | 10 | 10 | Weak Diffuse | pic | - | - |
AA 17-2 | O3:H2 | Chile | 10 | 10 | Aggregative-detaching | aagA, aggR, aap | + | - |
AA 253-1 | O3:H2 | Thailand | 10 | 10 | Aggregative | aagA, aggR, aap | + | - |
AA H232-1 | Â | Peru | 34 | 10 | Aggregative-detaching | aggR, aap, pic | + | - |
AA 60A | Â | Mexico | 34 | 10 | Aggregative | aagA, aggR, aap, pic | + | - |
AA DS67-R2 | Â | Philippines | 218 | 10 | Aggregative | aagA, aggR, aap | + | - |
AA 435-1 | O33:H16 | Thailand | 295 | 10 | Aggregative | pet, aafA, aggR, aap, pic | + | - |
AA 103-1 | O148:H28 | Thailand | 448 | 10 | Aggregative | Aap | + | - |
AA 501-1 | OR:H53 | Thailand | 518 | 10 | Aggregative | - | - | - |
AA H194-2 | Â | Peru | 433 | 10 | Aggregative | aagA, aggR, aap, pic | + | - |
AA 6-1 | OR:H2 | Thailand | 559 | 10 | Aggregative | aggR, aap | + | - |
AA DS65-R2 | Â | Philippines | unknown | unknown | Weak localized-aggregative | - | - | - |
AA H223-1 | Â | Peru | 451 | None | Aggregative | aggR, aap | + | - |
AA H38-1 | Â | Peru | 31 | 31 | Aggregative | aagA, aggR, aap | + | + |
AA 44-1 | O36:H18 | Thailand | 31 | 31 | Aggregative | aggR, aap, pic | + | + |
AA H145-1 | Â | Peru | 31 | 31 | Aggregative | aagA, aggR, aap, pic | + | + |
AA 309-1 | O130:H27 | Thailand | 31 | 31 | Aggregative | aagA, aggR, aap, pic | + | + |
AA 042 | O44:H18 | Peru | 414 | 31 | Aggregative | aafA, pet, aggR, aap, pic | + | + |
AA 144-1 | O77:NM | Thailand | 394 | 394 | Aggregative-detaching | aggR, aap | + | + |
AA 278-1 | O125ac:H21 | Thailand | 40 | 155 | Aggregative | aggR, aap, pic | + | - |
AA 239-1 | OR:H21 | Thailand | 40 | 155 | Aggregative | aggR, pic | + | - |
AA 199-1 | OR:H1 | Thailand | 200 | 155 | Aggregative | pet, aafA, aggR, aap, pic | + | - |