Table 1 Origin and genotypical characteristics of the ESBL-wild-type strains
Strain designation | Host | Origin | Sequence-type | ESBL-type | Plasmid-replicon- type | Toxin-antitoxin system | Other epigenomic resistance genes |
|---|---|---|---|---|---|---|---|
VB977549 | Dog (C. lupus familiaris) | Urinary tract infection | 131 | CTX-M-14, CTX-M-15 | FIA/FIB | pemI/K, vagC/D, hok/sok | blaTEM-1, blaOXA-1, tet(A), tet(R), aadA, aac(6’)-ib-cr |
IMT19205 | Brown rat (R. norvegicus) | Feces | 131 | CTX-M-9a, CTX-M-14, CTX-M-15 | FIA/FIB | hok/sok | blaTEM-1, tet(A), sul2, strA, aac(3)-IV, aac(6’)-Ib-cr. |
IMT27685 | Raven (C. corax) | Feces | 131 | CTX-M-15 | not typed | pemI/pemK, vagC/D | blaOXA-1, tet(A), sul1, strA, strB aac(6’)-Ib-cr |
IMT16316 | Blackbird (T. merula) | Feces | 648 | CTX-M-14, CTX-M-15 | FIA/FIB | pemI/K, vagC/D, srnB/C | tet(A), tet(R), sul1, sul2, strA, strB, aadA, aac(3)-II mph(A), mrx, mphR, dhfrVII, |
VB964041.2 | Horse (E. ferus caballus) | Soft tissue/wound infection | 648 | CTX-M-15 | FIA/FIB | pemI/K, vagC/D, srnB/C | tet(A), tet(R), sul1, sul2, strA, strB, aadA, mph(A), mphR, dhfrVII |
IMT21183 | Human (H. sapiens) | Urinary tract infection | 648 | CTX-M-14, CTX-M-15 | FIA | vagC/D, srnB/C | tet(A), tet(R), sul1, sul2, strA, strB, aadA, aac(3)-II, mph(A), mphR, dhfrVII |
IMT23463 | Monk vulture (A. monachus) | Feces | 648 | CTX-M-9 | FIB | PemI/pemK, srnB/C, hok/sok | blaTEM-1, blaOXA-1, tet(A),sul2, strA, strB, aac(6’)-Ib-cr |