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Table 3 SNVs of ATCC26695 sequence data from sample 6

From: Whole-genome sequencing of clarithromycin resistant Helicobacter pylori characterizes unidentified variants of multidrug resistant efflux pump genes

  Nucleotide position (NC_000915) Reference nucleotide (NC_000915) Mutated nucleotide Total reads Reads of mutated nucleotide Frequency of mutated nucleotide (%) Annotations
1 130106 T C 217 117 53.9 Gene: HP0119
2 130111 T G 186 94 50.5 Gene: HP0119
3 301322 G T 109 108 99.0 Gene: HP0289
4 1370263 G C 101 99 98.0 Gene: rpmJ
5 1428910 C A 137 104 75.9 Gene: HP1366
6 1502547 T C 345 184 53.3  
7 1502549 A G 345 184 53.3  
  1. Total reads and mutated reads indicate the number of reads that passed quality control.