Strain | Total reads (before trimming) | Total reads (after trimming) | Total consensus length (bp) | Total consensus coverage (%) | Average coverage (fold) | NCBI accession number |
---|---|---|---|---|---|---|
CLR-susceptible | Â | Â | Â | Â | Â | |
177 | 2,619,844 | 2,563,352 | 1,666,155 | 99.89 | 116.3 | DRS013118 |
179 | 2,291,578 | 2,269,154 | 1,560,395 | 93.55 | 131.8 | DRS013119 |
189 | 2,010,838 | 1,967,720 | 1,664,913 | 99.82 | 90.9 | DRS013120 |
F32 | 5,383,222 | 5,327,650 | 1,593,944 | 95.56 | 283.6 | DRS013121 |
F44 | 3,887,082 | 3,806,902 | 1,667,084 | 99.95 | 157.9 | DRS013122 |
F65 | 4,248,748 | 4,157,272 | 1,667,173 | 99.95 | 189.6 | DRS013123 |
F79 | 3,036,516 | 3,035,946 | 1,562,308 | 93.67 | 190.1 | DRS013124 |
CLR-resistant | Â | Â | Â | Â | Â | |
S1 | 2,271,944 | 2,271,890 | 1,571,448 | 94.21 | 149.2 | DRS013125 |
S2 | 5,962,628 | 5,962,428 | 1,587,965 | 95.20 | 342.2 | DRS013126 |
S4 | 4,640,490 | 4,640,330 | 1,578,524 | 94.64 | 262.8 | DRS013127 |
S8 | 10,869,516 | 10,868,918 | 1,610,753 | 96.57 | 686.3 | DRS013128 |
S13 | 3,873,394 | 3,873,000 | 1,563,976 | 93.77 | 264.2 | DRS013129 |
S16 | 6,782,392 | 6,781,628 | 1,594,857 | 95.62 | 448.2 | DRS013130 |
S17 | 5,700,038 | 5,699,336 | 1,596,480 | 95.71 | 327.3 | DRS013131 |
S22 | 6,597,254 | 6,596,450 | 1,598,844 | 95.86 | 426.8 | DRS013132 |
S23 | 1,820,652 | 1,820,436 | 1,559,100 | 93.47 | 125.5 | DRS013133 |
S26 | 6,692,038 | 6,691,390 | 1,584,702 | 95.01 | 442.9 | DRS013134 |
174 | 3,004,008 | 3,003,900 | 1,580,603 | 94.76 | 169.7 | DRS013135 |
194 | 6,936,714 | 6,921,552 | 1,600,238 | 95.94 | 415.2 | DRS013136 |