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Table 1 Key features of the B. pseudocatenulatum IPLA 36007 genome

From: The genome of Bifidobacterium pseudocatenulatum IPLA 36007, a human intestinal strain with isoflavone-activation activity

Characteristic

Figures

Observations

Size of the genome

2,328,179 bpa

 

G + C content

56.4%

 

Contigs

23

(from 203 to 548,016 bp long)

Open reading frames (ORFs)

1851

 

Coding sequences (CDS)

1769

 

Pseudogenes

22

 

RNA genes

60

5 rRNA operons, 54 tRNA, 1 ncRNA

Plasmidic genes

0

Plasmid free strain

Integrated phages

1

76 CDS

CRISPR-Cas system

1

22 repeats, 21 spacers, 8 CDS

Glycosyl-hydrolases and glycosyl transferases

>50

 

β-glucosidases

5

5 glycosyl hydrolases family_3, 1 glycosyl hydrolase family_1

  1. abp, base pair; ncRNA, non-coding RNA.