Skip to main content
Figure 5 | Gut Pathogens

Figure 5

From: Correlation between the genomic o454-nlpD region polymorphisms, virulence gene equipment and phylogenetic group of extraintestinal Escherichia coli (ExPEC) enables pathotyping irrespective of host, disease and source of isolation

Figure 5

VAGs importance for classification of the o454-nlpD patterns. A) VAGs ordered according to the mean decrease accuracy score. Values calculated from the 70% of the data set; B) VAGs ordered according to the mean decrease Gini score. Value based on the OOB (out-of-bag) data. The analysis was performed with the R-package ‘Random Forest’.

Back to article page