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Table 1 Summary of the control and V. parahaemolyticus infected transcriptome sequencing

From: RNA-seq analysis of Macrobrachium rosenbergii hepatopancreas in response to Vibrio parahaemolyticus infection

 

Control

V. parahaemolyticus infected

Total number of clean reads

54,708,014

54,295,342

Total base pairs (bp)

4,923,721,260

4,886,580,780

Q20 value

97.73%

97.77%

Total number of contigs

95,645

123,141

Mean length of contigs (bp)

313

318

Total number of unigenes

59,050

73,946

Mean length of unigenes (bp)

479

532

NCBI Nr annotated

  19,799

Swiss-Prot annotated

  16,832

KEGG annotated

  14,706

COG annotated

  7,856

GO annotated

  6,007