Skip to main content

Advertisement

Table 1 Summary of the control and V. parahaemolyticus infected transcriptome sequencing

From: RNA-seq analysis of Macrobrachium rosenbergii hepatopancreas in response to Vibrio parahaemolyticus infection

  Control V. parahaemolyticus infected
Total number of clean reads 54,708,014 54,295,342
Total base pairs (bp) 4,923,721,260 4,886,580,780
Q20 value 97.73% 97.77%
Total number of contigs 95,645 123,141
Mean length of contigs (bp) 313 318
Total number of unigenes 59,050 73,946
Mean length of unigenes (bp) 479 532
NCBI Nr annotated   19,799
Swiss-Prot annotated   16,832
KEGG annotated   14,706
COG annotated   7,856
GO annotated   6,007