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Table 2 Bacteria in the parental HMA mice and biopsy lysates used for their colonization, as identified by enzymatic tests and microscopy

From: Development of gut inflammation in mice colonized with mucosa-associated bacteria from patients with ulcerative colitis

  Aerobic bacteria Anaerobic bacteria
Biopsy a Klebsiella oxytoca
Proteus vulgaris
Streptococcus parvulus
Actinomyces naeslundii
Fusobacterium necrogenes/mortiferum
P aHMA mice Enterococcus faecalis
Enterococcus rafinosus
Enterococcus faecium
Streptococcus parvulus
Klebsiella pneumonie
Escherichia coli
Proteus vulgaris
Veillonella parvula
Bifidobacterium breve
Bifidobaterium sp.
Bacteroides capillosus
Actinomyces israelli
Unidentified G + cocci-rods
Unidentified G + rods
Biopsy b Escherichia coli
Klebsiella pneumonie
Enterococcus flavescens
Enterococcus casseliflavus
Actinomyces naeslundii
Veillonella parvula
Bifidobacterium sp.
P bHMA mice Enterococcus casseliflavus
Enterococcus faecalis
Enterococcus sp.
Klebsiella pneumonie
Citrobacter amalonaticus
Escherichia coli
Veillonella parvula
Eubacterium lentum
Bifidobacterium sp.
Actinomyces israelli
Lactobacillus sp.
Biopsy c Streptococcus sp.
Enterococcus faecium
Enterococcus raffinossus
Lactobacillus jensenii
P cHMA mice Yeast
Enteococcus faecium
Enterococcus raffinossus
Streptococcus parvulus
Clostridium inocuum
Bifidobacterium sp.
Unidentified G + spore-forming rods