Table 1 Virulence genes of NCCP15738
From: Draft genome sequence of non-shiga toxin-producing Escherichia coli O157 NCCP15738
Category | Subcategory | Genes | Gene name |
|---|---|---|---|
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2959 | ecpA |
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2960 | ecpB |
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2961 | ecpC |
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2962 | ecpD |
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2963 | ecpE |
Adherence | E. coli common pilus (ECP) | fig|562.1020.peg.2958 | ecpR |
Adherence | F1C fimbriae | fig|562.1020.peg.2245 | focC |
Adherence | Type I fimbriae | fig|562.1020.peg.1416 | fimA |
Adherence | Type I fimbriae | fig|562.1020.peg.2244 | fimA |
Adherence | Type I fimbriae | fig|562.1020.peg.1417 | fimB |
Adherence | Type I fimbriae | fig|562.1020.peg.1414 | fimC |
Adherence | Type I fimbriae | fig|562.1020.peg.944 | fimC |
Adherence | Type I fimbriae | fig|562.1020.peg.1413 | fimD |
Adherence | Type I fimbriae | fig|562.1020.peg.2246 | fimD |
Adherence | Type I fimbriae | fig|562.1020.peg.3956 | fimD |
Adherence | Type I fimbriae | fig|562.1020.peg.4109 | fimD |
Adherence | Type I fimbriae | fig|562.1020.peg.1412 | fimF |
Adherence | Type I fimbriae | fig|562.1020.peg.2247 | fimF |
Adherence | Type I fimbriae | fig|562.1020.peg.1411 | fimG |
Adherence | Type I fimbriae | fig|562.1020.peg.2248 | fimG |
Adherence | Type I fimbriae | fig|562.1020.peg.1410 | fimH |
Adherence | Type I fimbriae | fig|562.1020.peg.2249 | fimH |
Adherence | Type I fimbriae | fig|562.1020.peg.1415 | fimI |
Auto transporter | Adhesin involved in diffuse adherence | fig|562.1020.peg.1313 | aida |
Iron uptake | Salmochelin siderophore | fig|562.1020.peg.1061 | iroN |
Secretion system | LEE locus encoded TTSS | fig|562.1020.peg.3365 | escR |