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Table 4 Phage-associated regions of KP617 and the reference strains

From: Comparative genomic analysis of Klebsiella pneumoniae subsp. pneumoniae KP617 and PittNDM01, NUHL24835, and ATCC BAA-2146 reveals unique evolutionary history of this strain

Strain Chromosome/plasmid Region Region_length (Kb) Completeness Score #CDS Region_position Possible phage GC_percentage (%)
ATCC BAA-2146 Chromosome AC1 23.3 Questionable 75 14 596765–620097 Entero_P4 43.01
Chromosome AC2 52 Intact 100 70 1293924–1345940 Cronob_ENT47670 53.06
Chromosome AC3 37.5 Intact 150 48 1785522–1823022 Entero_Fels_2  51.11
Chromosome AC4 25.7 Incomplete 50 31 2283748–2309524 Entero_mEpX1 52.98
Chromosome AC5 45.6 Intact 110 62 2342458–2388075 Salmon_SEN34 51.79
Chromosome AC6 7 Incomplete 30 7 3543581–3550658 Shigel_SfIV 48.73
Chromosome AC7 45.1 Intact 106 57 3969834–4015015 Salmon_SPN1S 54.61
Chromosome AC8 24.7 Intact 150 31 4128565–4153295 Salmon_RE_2010 56.56
Chromosome AC9 25.7 Questionable 90 26 4910621–4936374 Salmon_ST64B 52.32
Plasmid1 AP1-1 16 Questionable 70 13 5385–21439 Staphy_SPbeta_like 57.65
Plasmid2 AP2-1 46 Intact 130 38 3924–49935 Stx2_converting_1717 51.29
Plasmid2 AP2-2 18.1 Questionable 70 23 37308–55427 Staphy_SPbeta_like 50.68
Plasmid2 AP2-3 18.7 Incomplete 30 21 66337–85097 Entero_P1 51.85
KP617 Chromosome KC1 59.4 Intact 140 78 187337–246765 Salmon_E1 53.99
Chromosome KC2 52.2 Intact 150 51 1148902–1201105 Entero_HK140 54.02
Chromosome KC3 37.3 Intact 150 39 1524848–1562220 Salmon_SEN4 50.97
Chromosome KC4 43.1 Questionable 90 52 4912300–4955407 Escher_HK639 52.40
Chromosome KC5 20 Incomplete 30 17 5015118–5035178 Entero_phiP27 51.93
Plasmid1 KP1-1 20.7 Incomplete 50 25 123005–143753 Escher_Av_05. 0.4718
NUHL24835 Chromosome NC1 41.6 Intact 140 47 132925–174606 Entero_HK140 50.75
Chromosome NC2 12.8 Incomplete 30 14 1481474–1494341 Thermu_phiYS40 58.36
Chromosome NC3 34.7 Intact 150 32 1524859–1559640 Entero_c_1 52.15
Chromosome NC4 41.9 Intact 150 52 4283813–4325722 Entero_Fels_2 53.26
Chromosome NC5 38.7 Intact 150 45 5082826–5121566 Entero_mEp235 50.24
Plasmid1 NP1-1 21.4 Incomplete 30 6 65638–87083 Entero_P1 49.29
PittNDM01 Chromosome PC1 50.8 Intact 130 63 209103–259953 Vibrio_pYD38_A 53.35
Chromosome PC2 49.9 Intact 120 65 4847596–4897574 Salmon_SPN3UB 51.59
Chromosome PC3 20 Incomplete 30 19 4961006–4981067 Entero_P4 51.92
Plasmid1 PP1-1 30.8 Questionable 70 22 124082–154939 Vibrio_pYD38_A 48.18
Plasmid2 PP2-1 34.3 Questionable 70 27 556–34952 Entero_P1 52.30
Plasmid3 PP3-1 50.3 Intact 150 56 8885–59236 Entero_P1 53.90