From: Antimicrobial resistance of Campylobacter isolates from small scale and backyard chicken in Kenya
Antibiotic | Method | Primer | Sequence (5’–3’) | Amplicon length (bp) | Reference |
---|---|---|---|---|---|
Erythromycin | MAMA–PCRa |
23SRNA-F ERY2075-R ERY2074-R |
TTA GCT AAT GTT GCC CGT ACC G TAG TAA AGG TCC ACG GGG TCG C AGT AAA GGT CCA CGG GGT CTG G | 485 | [17] |
PCR–RFLPa |
F2-campy-23S R2-campy-23S |
AAT TGA TGG GGT TAG CAT TAG C CAA CAA TGG CTC ATA TAC AAC TGG | 316 | [20] | |
Ciprofloxacin | MAMA–PCRb |
CampyMAMAgyrA1 CampyMAMAgyrA5 |
TTT TTA GCA AAG ATT CTG AT CAA AGC ATC ATA AAC TGC AA | 265 | [19] |
MAMA–PCRc |
GZgyrACcoli3F CanpyMAMAgyrA8 |
TAT GAG CGA TAT TAT CGG TC TAA GGC ATC GTA AAC AGC CA | 192 | [24] | |
Tetracycline | tet(O) PCR |
DMT 1 DMT 2 |
GGC GTT TTG TTT ATG TGC G ATG GAC AAC CCG ACA GAA GC | 559 | [25] |
tet(A) PCR |
Tet(A)-F Tet(A)-R |
GTG AAA CCC AAC ATA CCC C GAA GGC AAG CAG GAT GTA G | 888 | [18] | |
tet(A) PCR |
tet-A-1 tet-A-2 |
GCT CAC GTT GAC GCA GGA AAG ATC GTC ATT GTC CGT TAC | 486 | This study |