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Table 2 Primer sequences and their corresponding genes used for the detection of S. enterica serovar Enteritidis and S. enterica serovar Typhimurium

From: Epidemiological, molecular characterization and antibiotic resistance of Salmonella enterica serovars isolated from chicken farms in Egypt

Gene

Oligonucleotide sequence (5′–3′)

Annealing (°C)

Amplicon size (bp)

Reference

invA-F

GCT GCG CGC GAA CGG CGA AG

62

389

[32]

invA-R

TCC CGG CAG AGT TCC CAT T

SdfI-F

TGTGTTTTATCTGATGCAAGAGG

58

293

[33]

SdfI-R

CGTTCTTCTGGTACTTACGATGAC

SdfII-F

GCGAATATCATTCAGGATAAC

58

450

[33]

SdfII-R

GCATGTCATACCGTTGTGGA

SdfIII-F

GCTGACTCACACAGGAAATCG

58

350

[33]

SdfIII-R

TCTGATAAGACTGGGTTTCACT

SefA-F

GCC GTA CAC GAG CTT ATA GA

55

250

[33]

SefA-R

ACC TAC AGG GGC ACA ATA AC

Sal fliC-F

CCCCGCTTACAGGTGGACTAC

62

433

[35]

Sal fliC-R

AGCGGGTTTTCGGTGGTTGT

SopE-F

ACA CAC TTT CCA CGA GGA AGC G

55

398

[36]

SopE-R

GGA TGC CTT CTG ATG TTG ACT GG

Typh-F

TTGTTCACTTTTTACCCCTGA A

55

401

[34]

Typh-R

CCCTGACAGCCGTTAGATATT