Table 5 Prevalence of virulence genes in each cluster
Cluster | No. of isolates | Serotype (no. of isolates in each serotype) | Prevalence of virulence genes (%) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
eae | tir | esp B | esp D | ehx A | kat P | esp P | iha | sub A | stc E | Saa | |||
1 | 3 | O119 (3) | 100.0 | 0.0 | 0.0 | 0.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
2 | 1 | O185 (1) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 |
3 | 5 | O15 (3), O109 (2) | 0.0 | 20.0 | 0.0 | 0.0 | 40.0 | 0.0 | 40.0 | 40.0 | 0.0 | 0.0 | 0.0 |
4 | 47 | O84 (4), O108 (5), O111 (2), O157 (35), NT (1) | 97.9 | 93.6 | 100.0 | 87.2 | 100.0 | 74.5 | 93.6 | 78.7 | 0.0 | 87.2 | 0.0 |
5 | 6 | O8 (4), O169 (1), NT (1) | 0.0 | 33.3 | 0.0 | 0.0 | 100.0 | 0.0 | 100.0 | 50.0 | 83.3 | 0.0 | 100.0 |
6 | 1 | O55 (1) | 0.0 | 100.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |