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Table 5 The associations between virulence genes among Escherichia coli in phylogenetic group A (n = 232)

From: Antibiotic resistance, serogroups, virulence genes, and phylogenetic groups of Escherichia coli isolated from yaks with diarrhea in Qinghai Plateau, China

Gene

No. (%) of isolates in phylogroup A

(n = 232)

Associations of gene (OR, 95% confidence interval)*,a

sfa

eaeA

cnf1

etrA

papC

hlyA

aer

faeG

rfc

sepA

sfa

223

ns

–

–

8.5 (0.5–148.9)

–

–

0.2 (0.1–0.8)

–

–

–

eaeA

174

–

ns

28.4 (9.8–82.4)

17.5 (4.1–74.2)

9.2 (2.7–30.5)

–

–

–

–

na

cnf1

122

–

28.4 (9.8–82.4)

ns

65.8 (15.5–78.6)

32.3 (9.7–107.4)

6.4 (2.6–16.0)

7.1 (2.71–9.2)

–

–

na

etrA

69

8.5 (0.5–148.9)

17.5 (4.1–74.2)

65.8 (15.5–278.6)

ns

–

2.1 (1.0–4.2)

–

9.1 (1.8–44.9)

na

na

papC

61

–

9.2 (2.7–30.5)

32.3 (9.7–107.4)

–

ns

41.8 (15.0–116.3)

14.3 (6.2–33.1)

62.1 (3.5–1084.4)

14.4 (0.7–304.5)

14.4 (0.7–304.5)

hlyA

39

–

–

6.4 (2.6–16.0)

2.1 (1.0–4.2)

41.8 (15.0–116.3)

ns

5.1 (2.3–11.3)

–

–

na

aer

36

0.2 (0.1–0.8)

–

7.1 (2.7–19.2)

–

14.3 (6.2–33.1)

5.1 (2.3–11.3)

ns

23.4 (4.6–118.2)

–

na

faeG

9

–

–

–

9.1 (1.8–44.9)

62.1 (3.5–1084.4)

–

23.4 (4.6–118.2)

ns

na

27.7 (1.6–484.6)

rfc

2

–

–

–

–

14.4 (0.7–304.5)

–

–

–

ns

229 (7.7–684.3)

sepA

2

–

–

–

–

14.4 (0.7–304.5)

–

–

27.7 (1.6–484.6)

229 (7.7–684.3)

ns

  1. –, indicates no significant associations (P ≥ 0.05); na, no results available (OR could not be calculated because none of the isolates carried one of the combinations of virulence genes or the value of one of the genes was a constant or zero); ns, no statistics were determined
  2. * Only virulence genes with a significant association (P < 0.05) are shown
  3. aOdds ratio (OR) for significant associations between virulence genes (95% confidence interval in parenthesis)