Skip to main content

Table 1 ORFs identified in the EPS gene cluster of B. longum 105-A

From: Capsular polysaccharide inhibits adhesion of Bifidobacterium longum 105-A to enterocyte-like Caco-2 cells and phagocytosis by macrophages

ORF Gene Size (bp) Predicted encoded function Best BLAST hit Identity (%)
Protein (accession no.) Organism
BL105A_0403   1272 IS30 family transposase WP_008783747.1 MULTISPECIES 99
BL105A_0405 cpsD welE 1476 Undecaprenyl-phosphate galactose phosphotransferase; priming GTF CCY95224 B. longum CAG:69 99
BL105A_0406 DUF4012 1730 Auxiliary protein for envelope protein WP_008783638 Bifidobacterium sp.12 1 47BFAA 97
Late cornified envelope protein 3C
BL105A_0407 wzz 1460 Chain length determinant protein WP_007057839.1 B. longum 97
BL105A_0408 cpsA 1154 GTF family 1 WP_023658085.1 B. longum 100
BL105A_0409 cpsB 1295 GTF WP_041080238.1 B. longum 100
BL105A_0410 cpsC 1151 GTF WP_008704446.1 Ruminococcus sp. 5 1 39 BFAA 68
BL105A_0411 cpsE 1964 Possible GTF WP_009854068.1 Streptococcus gallolyticus 41
BL105A_0412 cpsF 890 GTF WP_015131440.1 Calothrix sp.PCC 7507 29
BL105A_0413 cpsG 533 Possible GTF WP_009854068.1 Streptococcus gallolyticus 42
BL105A_0414 wzy 797 Oligosaccharide repeat unit polymerase WP_009854069 Streptococcus gallolyticus 34
BL105A_0415 cpsP 1100 Polysaccharide pyruvyl transferase WP_004405434 Vibrio nigripulchritudo 26
BL105A_0416 wzx 1460 Flippase CAI33492 Streptococcus pneumonia 41
BL105A_0417 cpsO 245 Maltose O-acetyltransferase domain protein WP_009621938.1 Desulfosporosinus sp. OT 59
BL105A_0418 Int 834 Integrase catalytic region BAP83067.1 B. longum 100
BL105A_0419 istB 834 Transposase (IstB-like ATP-binding protein) BAP83067.1 B. longum  
BL105A_0420   1494 Integrase core domain ALE36745.1 B. longum 100
BL105A_0421 insE 1549 Transposase (integrase) WP_042764841.1 Streptococcus pyogenes 99
BL105A_0422 insE 408 Transposase WP_047379062.1 B. longum  
BL105A_0423   669 Integrase catalytic region WP_047379102.1 B. longum 97
BL105A_0424 rmlB rfbB 1022 dTDP-d-Glucose 4,6-dehydratase WP_047379646.1 B. longum 98
BL105A_0425   1272 Hypothetical gene WP_047379940.1 B. longum 99
BL105A_0426 rmlC rfbC 1457 Possible dTDP-4-keto-6-deoxy-d-glucose epimerase WP_047379058.1 B. longum 94
BL105A_0427 rmlA rfbA 899 Glucose-1-phosphate thymidyl transferase Glucose-1-phosphate thymidyly 1 transferase B. longum 99