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Table 4 SNPs identified in the ST201 genomes against the ST1 and the ST11 genomes

From: Genome characterization of a novel binary toxin-positive strain of Clostridium difficile and comparison with the epidemic 027 and 078 strains

 

Nos. of SNPs

Non-synonymous

Synonymous

DN/dS

LC693 vs. R20291

54,837 (41,696a)

15,172

26,524

0.57

VL-0104 vs. R20291

52,580 (39,912a)

14,687

25,225

0.58

VL-0319 vs. R20291

52,447 (39,065a)

14,127

24,938

0.57

Subtotal

159,864 (120,673a)

43,986

76,687

0.57

LC693 vs. M120

107,738 (82,855a)

25,643

57,212

0.45

VL-0104 vs. M120

107,889 (82,872a)

26,258

56,614

0.46

VL-0319 vs. M120

107,694 (81,424a)

25,046

56,378

0.44

Subtotal

323,321 (247,151a)

76,947

170,204

0.45

  1. aIndicates the number of SNPs in CDSs