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Fig. 2 | Gut Pathogens

Fig. 2

From: Prevailing clone (ST69) of Vibrio cholerae O139 in India over 10 years

Fig. 2

The evolutionary history was inferred using the Neighbor-Joining method. The optimal tree with the sum of branch length = 0.03301416 is shown. The tree is drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree. The evolutionary distances were computed using the Maximum Composite Likelihood method and are in the units of the number of base substitutions per site. The analysis involved 20 nucleotide sequences. Codon positions included were 1st + 2nd + 3rd + Noncoding. All positions containing gaps and missing data were eliminated. There were a total of 3215 positions in the final dataset. Evolutionary analyses were conducted in MEGA7

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