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Table 3 Cronobacter strains studied using the FDA Cronobacter custom designed DNA microarray

From: Genomic characterization of malonate positive Cronobacter sakazakii serotype O:2, sequence type 64 strains, isolated from clinical, food, and environment samples

Strain name Species Source Serotype MLST
LMG26520T C. condimenti Food, spiced sausage, Slovakia ND 98
KW5 C. dublinensis Food, black rice, Republic of Korea Cdub O:1 ND
3_27 C. dublinensis Food, nuts, Republic of Korea Cdub O:1 ND
2_14 C. dublinensis Food, nuts, Republic of Korea Cdub O:1 ND
CFS237 C. dublinensis Environmental, milk production facility, Ireland Cdub O:1 106
Comp56 C. dublinensis Environmental, compliance activity, USA Cdub O:1 ND
5960_70 C. dublinensis Clinical, blood ND 5
SUN_1 C. dublinensis Food, taro, Republic of Korea ND ND
6_3G C. dublinensis Food, nuts, Republic of Korea Cdub O:1 ND
6_15G C. dublinensis Food, nuts, Republic of Korea Cdub O:2 ND
464 C. dublinensis Environmental, milk production facility ND 79
E515C C. dublinensis Environmental, water fountain basin Cdub O:2 80
J160 C. malonaticus Environmental, vacuum dust, Jordan Csak O:2 ND
J168B C. malonaticus Environmental, vacuum dust, Jordan Csak O:2 ND
GK1349 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1354 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1355 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1356 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1357 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1358 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1360 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1510 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1512 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK1518 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
GK796A_2 C. malonaticus PIF Facility; Hanover, Germany Csak O:5 ND
Sh41g C. malonaticus Fly, Sarcophaga haemorrhoidalis, gut, USA ND ND
Md99g C. malonaticus Fly, Musca domestica, gut, USA Cmal O:1 60
CI825 C. malonaticus Clinical, breast abcess, USA Cmal O:2 7
Md25g C. malonaticus Fly, Musca domestica, gut, USA Cmal O:2 7
51329 C. muytjensii Unknown Cmuy O:2 81
J112 C. muytjensii Food, liquorice, Jordan ND ND
GK1257 C. muytjensii PIF Facility; Hanover, Germany ND ND
J171 C. muytjensii Food, spices (Fennel), Jordan ND ND
GK1258 C. muytjensii PIF Facility; Hanover, Germany Csak O:1 ND
J174 C. muytjensii Food, spices (Anise), Jordan Cmuy O:1 ND
J176 C. muytjensii Food, spices (Thyme), Jordan ND ND
J77 C. muytjensii Food, spices (Anise), Jordan Cmuy O:2 ND
J95 C. muytjensii Food, spices (Anise), Jordan ND ND
J100 C. sakazakii Food, semolina, Jordan Csak O:2 ND
J103 C. sakazakii Food, spices, Jordan Csak O:2 ND
J109 C. sakazakii Food, grapes, Jordan Csak O:2 ND
J146 C. sakazakii Food, liquorice, Jordan Csak O:2 ND
GK1025 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
GK1027 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
J148 C. sakazakii Food, spices, Jordan Csak O:2 4
BAA894 C. sakazakii PIF, USA Csak O:1 1
GK1028 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
GK1030 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
GK1032 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
J151 C. sakazakii Food, spices (Fennel), Jordan Csak O:1 ND
J154 C. sakazakii Food, spices, Jordan Csak O:3 4
3_21 C. sakazakii Food, nuts, Republic of Korea Csak O:1 ND
GK1033 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1034 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
GK1035 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 64
GK1036 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1151 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 ND
GK1152 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1153 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
E654 C. sakazakii Clinical, Ireland Csak O:1 1
E657 C. sakazakii Clinical, Ireland Csak O:1 1
GK1154 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
E760 C. sakazakii Clinical, Ireland Csak O:2 264
GK1155 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
CDC1121_73 C. sakazakii Clinical, bronchial wash, USA Csak O:2 64
GK1156 C. sakazakii PIF Facility, Hanover, Germany Cmal O:2 ND
GK1157 C. sakazakii PIF Facility; Hanover, Germany Csak o:2 4
E772 C. sakazakii Food, milk powder, France Csak O:2 64
GK1158 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK1159 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
5_21G C. sakazakii Food, nuts, Republic of Korea Csak O:2 ND
5_20G C. sakazakii Food, nuts, Republic of Korea Csak O:2 ND
1_15 C. sakazakii Food, nuts, Republic of Korea Csak O:2 ND
KW10 C. sakazakii Food, powdered pine needles, Republic of Korea Csak O:2 ND
J172 C. sakazakii Food, spices, Jordan Csak O:2 ND
Es35 C. sakazakii Clinical, Israel Csak O:1 8
5_17G C. sakazakii Food, nuts, Republic of Korea Csak O:1 ND
J173 C. sakazakii Food, spices, Jordan Csak O:1 ND
E755 C. sakazakii Clinical, Ireland Csak O:4 8
E758 C. sakazakii Clinical, Ireland Csak O:4 8
E756 C. sakazakii Clinical, Ireland Csak O:4 8
A48g C. sakazakii Fly, Anthimylidae, gut, USA Csak O:6 221
E656 C. sakazakii Clinical, Ireland Csak O:1 8
J175 C. sakazakii Food, spices, Jordan Csak O:1 ND
2193_16_02 C. sakazakii Food, nursery water, USA Csak O:1 8
2193_16_02_2 C. sakazakii Food, nursery water, USA Csak O:1 8
2193_08 C. sakazakii Food, nursery water, USA Csak O:1 8
18_01 C. sakazakii Patient, stool sample, USA Csak O:1 4
18_05_03 C. sakazakii Food, opened can of PIF, USA Csak O:1 8
18_07 C. sakazakii Patient, stool sample, USA Csak O:1 8
29544T C. sakazakii Clinical (child), throat swab, USA Csak O:1 8
701753 C. sakazakii Environmental, PIF plant, USA Csak O:2 31
KW11 C. sakazakii Food, black bean, Republic of Korea Csak O:4 ND
CI764 C. sakazakii Clinical, Ireland Csak O:4 12
GK1260 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 1
E837 C. sakazakii Clinical, Ireland Csak O:2 ND
J183 C. sakazakii Food, spices, Jordan Csak O:1 21
J20 C. sakazakii Food, spices, Jordan Csak O:1 ND
J204_2 C. sakazakii Food, liquorice, Jordan Csak O:7 223
J22 C. sakazakii Food, spice (Chamomile), Jordan Csak O:1 ND
J32 C. sakazakii Food, baby food, Jordan Csak O:3 ND
J44 C. sakazakii Food, spices, Jordan Csak O:1 ND
2156_3 C. sakazakii Clinical, blood, USA Csak O:3 4
GK1263B2 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK1264 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK1265 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1266A2 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1312 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1314 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1315 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1316 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 ND
GK1317 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1318 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1319 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1320 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1322 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1322A_2 C. sakazakii PIF Facility; Hanover, Germany ND ND
GK1328B_2 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK1351 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
206 N C. sakazakii Clinical, Ireland Csak O:2 4
306 N C. sakazakii Clinical, Ireland Csak O:2 4
255 N C. sakazakii Clinical, Ireland Csak O:2 4
E788 C. sakazakii Clinical, Ireland Csak O:2 4
GK1352 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
2193_03 C. sakazakii Clinical, CSF, USA Csak O:2 4
4_01C_5ug C. sakazakii Food, PIF Csak O:2 218
E899 C. sakazakii Clinical, USA Csak O:2 4
2151 C. sakazakii Clinical, USA Csak O:2 4
GK1511 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
GK1513 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
2193_02 C. sakazakii Clinical, sputum, USA Csak O:2 4
9368_75 C. sakazakii Unknown Csak O:2 4
9369_75 C. sakazakii Unknown Csak O:4 4
GK1519 C. sakazakii PIF Facility; Hanover, Germany csak O:1 ND
GK1520 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
GK1521 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
GK1574 C. sakazakii PIF Facility; Hanover, Germany Csak O:4 ND
J93 C. sakazakii Food, spices, Jordan Csak O:2 ND
E893 C. sakazakii Clinical, Ireland Csak O:2 4
GK1576 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
GK792_3 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 83
GK793 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 1
GK794 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 83
J96 C. sakazakii Food, spices (Fennel), Jordan Csak O:3 ND
GK797 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 ND
GK798 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK799AB_3F C. sakazakii PIF Facility; Hanover, Germany Csak O:7 83
GK800 C. sakazakii PIF Facility; Hanover, Germany Csak O:7 83
GK801 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK951 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK952 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK954 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK956 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK958 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK959 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK960 C. sakazakii PIF Facility; Hanover, Germany Csak O:1 ND
GK961 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
GK963_1 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 ND
GK964 C. sakazakii PIF Facility; Hanover, Germany Csak O:2 4
680 C. turicensis Food, unspecified ND 48
797 C. universalis Environmental, water, UK Cuni O:1 54
Md1 s C. turicensis Fly, Musca domestica, surface, USA ND 7
2_15 C. turicensis Food, nuts, Republic of Korea ND ND
Sh41 s C. turicensis Fly, Sarcophaga haemorrhoidalis, gut, USA ND ND
3_24 C. turicensis Food, nuts, Republic of  Korea Csak O:5 ND
5_15G C. turicensis Food, nuts, Republic of Korea Csak O:5 ND
Comp12 C. turicensis Environmental, compliance activity, USA ND 24
Comp44 C. turicensis Environmental, compliance activity, USA ND 24
Comp66 C. turicensis Environmental, compliance activity, USA Ctur O:1 ND
3032 C. turicensis Clinical (neonate), blood, Switz. Ctur O:1 19
576 C. freundii Unknown ND ND
CQ118 E. hormaechei PIF Facility; Dublin Ireland ND ND
1159/04 F. helveticus LMG 23733, fruit punch powder, Switz. ND ND
513/05T F. helveticus LMG 23732T, fruit punch powder, Switz. ND ND
1160/04 F. pulveris LMG 24058, fruit punch powder, Switz. ND ND
601/05T F. pulveris LMG 24057T, fruit punch powder, Switz. ND ND
508/05T S. turicensis LMG 23730T, fruit punch powder, Switz. ND ND
214 K. pneumoniae Unknown ND ND
SalSTM Salmonella typhimurium Unknown ND ND
GK1313 Non-Cronobacter PIF Facility; Hanover, Germany ND ND
GK792_1 Non-Cronobacter PIF Facility; Hanover, Germany ND ND
GK792_2 Non-Cronobacter PIF Facility; Hanover, Germany ND ND
GK795 Non-Cronobacter PIF Facility; Hanover, Germany ND ND
GK963_2 Non-Cronobacter PIF Facility; Hanover, Germany ND ND