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Table 1 Proportion of trimmed reads mapped to the CDC:HCNY16:01 draft genome assembly using oocysts from three representative samples

From: Purification of Cyclospora cayetanensis oocysts obtained from human stool specimens for whole genome sequencing

Purification status of oocysts Number of mapped reads/total number of reads = % of reads mapped to HCNY assembly
CDC:HCRI01:97 CDC:HCGM01:97 CDC:HCTX69:14
Before flow sorting 2,262,396/9,739,022 = 23% 1,781,583/9,315,212 = 19% 163,179/2,767,726 = 6%
Flow cytometry sorted 6,282,480/7,785,610 = 81% 5,954,094/6,137,902 = 97% 2,486,477/2,888,1657 = 86%