Skip to main content

Table 1 Fecal bacteria associated with Crohn’s disease

From: Microbiota profile in new-onset pediatric Crohn’s disease: data from a non-Western population

Phylogenetic level Abundance CD (%) Abundance control (%) Ratio FDR corrected p-value
Order
 Spirochaetales 0.003 0.02 0.11 0.0002
 Lactobacillales 0.32 2.42 0.13 0.008
 Fusobacteriales 0.32 0.01 23.4 0.01
 Erysipelotrichales 0.04 0.23 0.19 0.01
 Pseudomonadales 0.33 0.01 22.5 0.01
 Rhizobiales 0.02 0.04 0.51 0.02
 Actinomycetales 0.01 0.05 0.25 0.03
Family
 Spirochaetaceae 0.003 0.02 0.11 0.00037
 Comamonadaceae 0.005 0.02 0.24 0.01
 Moraxellaceae 0.23 0.004 58.8 0.01
 Fusobacteriaceae 0.32 0.01 23.4 0.01
 Erysipelotrichaceae 0.04 0.23 0.19 0.01
 Streptococcaceae 0.14 1.23 0.11 0.01
 Lactobacillaceae 0.05 0.22 0.22 0.01
 Clostridiaceae 1.71 6.7 0.25 0.02
Genus
 Mitsuokella 0.002 0.07 0.03 0.0001
 Turicibacter 0.01 0.19 0.06 0.0018
 Peptostreptococcus 0.06 0.002 40.7 0.002
 Intestinibacter 0.04 0.25 0.16 0.002
 Psychrobacter 0.12 0.001 81.0 0.004
 Ruminiclostridium 0.03 0.27 0.12 0.011
 Paludibacter 0.008 0.06 0.13 0.011
 Fusobacterium 0.32 0.01 23.4 0.011
 Streptococcus 0.13 1.22 0.11 0.013
 Lactobacillus 0.05 0.22 0.21 0.013
 Acinetobacter 0.09 0.003 27.8 0.013
 Megasphaera 0.01 0.07 0.18 0.013
 Clostridium 1.67 6.62 0.25 0.02
 Ruminococcus 0.57 3.72 0.15 0.02
 Roseburia 0.24 1.04 0.23 0.04
Species
 Roseburia inulinivorans 0.02 0.59 0.03 0.00019
 Bacteroides clarus 0.33 0.01 25.9 0.0002
 Clostridium disporicum 0.008 0.30 0.03 0.0007
 Turicibacter spp. 0.01 0.18 0.06 0.0019
 Ruminiclostridium eubacterium siraeum 0.006 0.14 0.04 0.0019
 Intestinibacter clostridium bartlettii 0.04 0.25 0.16 0.0019
 Bacteroides xylanolyticus 0.01 0.35 0.04 0.0019
 Psychrobacter pulmonis 0.12 0.001 80.9 0.0035
 Ruminococcus spp. 0.18 1.47 0.12 0.0037
 Streptococcus salivarius 0.07 1.02 0.07 0.0070
 Ruminococcus flavefaciens 0.04 0.98 0.04 0.010
 Fusobacterium nucleatum 0.25 0.01 21.6 0.01
 Eubacterium spp. 0.07 0.68 0.11 0.02
 Eubacterium hallii 0.05 0.34 0.15 0.04
  1. FDR false discovery rate