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TableĀ 1 Features of outbreak associated Salmonella ser. Heidelberg strains

From: Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg

Assigned name Biosample ID Isolation location Year Host Tissue Lesions safABCD
USA293 SAMN04240660 USA:IA 2015 Bovine Lung, LN, intestine, kidney Enteritis; lymphadenitis +
USA420 SAMN06330648 USA:NE 2016 Bovine Fecals No tissues +
USA520 SAMN03734290 USA:SD 2014 Bovine Intestine, LN, liver Ileitis +
USA521 SAMN03734314 USA:SD 2014 Bovine Lung, liver, intestine Enteritis; lymphadenitis +
USA522 SAMN05781470 USA:SD 2016 Bovine Intestine, LN, liver, kidney Villous atrophy +
USA523 SAMN05781531 USA:SD 2016 Bovine Intestine, abomasum Enteritis +
USA524 SAMN06330649 USA:SD 2016 Bovine Intestine No lesions +
USA526 SAMN06648142 USA:SD 2016 Bovine Intestine No lesions, autolysis +
USA585 SAMN08150382 USA:WI 2016 Bovine Intestine, spleen, lung Bronchopneumonia 3/5; lymphoid depletion +
USA586 SAMN08150383 USA:WI 2016 Bovine Intestine, LN, lung, bile, liver Fibrinonecrotic enteritis +
USA587 SAMN08150384 USA:WI 2016 Bovine Intestine, Lung, LN Mild enteritis; lymphoid depletion +
USA588 SAMN08150385 USA:MN 2017 Bovine Intestine, LN, lung, abomasum Enteritis; lymphadenitis +
USA084 SAMN06231053 USA 2016 bovine N/A* N/A* +
USA089 SAMN05916660 USA 2016 bovine N/A* N/A* +
USA099 SAMN06012648 USA 2016 bovine N/A* N/A* +
USA397 SAMN05752003 USA:MN 2016 bovine Fecals N/A* +
USA460 SAMN05710975 USA:NY 2016 bovine Intestine N/A* +
USA538 SAMN05757192 USA:TX 2011 bovine Comminuted beef N/A* +
USA582 SAMN05852396 USA:WV 2009 bovine Raw ground beef N/A* +
USA114 SAMN06290379 USA 2016 Environmental Swab N/A* +
USA115 SAMN06290384 USA 2016 Environmental Swab N/A* +
USA116 SAMN06290387 USA 2016 Environmental Swab N/A* +
USA117 SAMN06290388 USA 2016 Environmental Swab N/A* +
USA074 SAMN05773458 USA 2015 Human Stool N/A* +
USA080 SAMN05714563 USA 2015 Human Stool N/A* +
USA094 SAMN05773457 USA 2016 Human Urine N/A* +
USA104 SAMN06235037 USA 2016 Human Blood N/A* +
USA107 SAMN07177558 USA 2016 Human Blood N/A* +
USA113 SAMN06290389 USA 2016 Human Blood N/A* +
USA120 SAMN06688282 USA 2017 Human Stool N/A* +
USA088 SAMN05916659 USA 2016 Other Intestine N/A* +
USA303 SAMN07611477 USA:IL 2017 Porcine Raw ground pork N/A* +
  1. A comparison of virulence factors safA, safB, safC and safD as well as pathologic findings between newly sequenced bovine isolates and other members of cluster bovine
  2. N/A* data not available