Characterization of internalin genes in Listeria monocytogenes from food and humans, and their association with the invasion of Caco-2 cells

Su, Xudong; Cao, Guojie; Zhang, Jianmin; Pan, Haijian; Zhang, Daofeng; Kuang, Dai; Yang, Xiaowei; Xu, Xuebin; Shi, Xianming; Meng, Jianghong

doi:10.1186/s13099-019-0307-8

Gut Pathogens

Table 1 Origin and genetic characteristics of 42 L. monocytogenes isolates

From: Characterization of internalin genes in Listeria monocytogenes from food and humans, and their association with the invasion of Caco-2 cells

Strain	Serotype/lineage	Genome size (Mb)	GC content (%)	Source	Year	Country	GenBank accession
SHL001	1/2a, II	2.95	37.9	CSF^c	2007	China	APIB00000000^b
SHL002	1/2b, I	3.12	37.9	Blood	2007	China	APIC00000000 ^b
SHL003	1/2b, I	3.00	37.9	Blood	2008	China	LVYC00000000
SHL004	1/2a, II	3.01	37.8	Blood	2008	China	APID00000000^b
SHL005	1/2a, II	2.88	37.9	Blood	2008	China	APIE00000000^b
SHL006^a	1/2c, II	2.93	37.9	Blood	2010	China	APIF00000000^b
SHL007	1/2b, I	2.98	37.9	Blood	2011	China	APIG00000000^b
SHL008	1/2b, I	3.01	37.9	Blood	2012	China	APIH00000000^b
SHL009	1/2a, II	2.87	37.9	Blood^d	2012	China	APII00000000^b
SHL010	1/2b/I	3.08	37.9	Blood	2012	China	APIJ00000000^b
SHL011	1/2a, II	2.87	37.9	Blood	2011	China	APIK00000000^b
SHL012	1/2b, I	2.93	37.9	CSF^c	2010	China	APIL00000000^b
SHL013	1/2a, II	2.86	37.9	Blood^d	2012	China	APIM00000000^b
LM430^a	1/2c, II	2.95	37.9	Pork	2008	China	AWWQ00000000^b
LM438	1/2a, II	2.96	38.7	Beef	2008	China	AWWR00000000^b
LM440^a	1/2c, II	2.97	37.7	Fish	2008	China	AWWS00000000^b
LM469	1/2a, II	2.95	38.7	Bean	2004	China	AWWT00000000^b
LM470^a	1/2c, II	2.94	37.8	Vegetable	2004	China	AWWU00000000^b
SHL12-2^a	1/2c, II	2.99	37.9	Pork	2012	China	LRTW00000000
SHL12-22^a	1/2a, II	2.97	37.9	Duck	2012	China	LRTX00000000
SHL13-12^a	1/2a, II	2.98	37.9	Duck	2013	China	LRTY00000000
EGD-e	1/2a, II	2.94	38.0	Rabbit	1926	UK	AL591824.1
10403S	1/2a, II	2.90	38.0	Human	1968	U.S.	CP002002
F6900	1/2a, II	2.97	37.7	Human	1989	U.S.	AARU02000000
J2818	1/2a, II	2.97	37.7	Human	2000	U.S.	AARX02000000
J0161	1/2a, II	3.00	37.9	Human	2000	U.S.	CP002001
08-5578	1/2a, II	3.03	38.0	Human	2008	Canada	CP001602.1
08-5923	1/2a, II	3.00	38.0	Human	2008	Canada	CP001604
SLCC5850	1/2a, II	2.91	38.0	Rabbit	1924	UK	FR733647
F6854	1/2a, II	2.95	37.8	Hot dog	1988	U.S.	AADQ01000000
C1-387	1/2a, II	2.99	37.9	Food	1999	U.S.	CP006591
FSL N3-165	1/2a, II	2.88	37.8	Soil	N.A.	U.S.	AARQ02000000
SLCC2755	1/2b, I	2.97	38.1	Human	N.A.	N.A.	NC_018587
FSL J1-194	1/2b, I	2.99	37.8	Human	N.A.	U.S.	AARJ00000000
R2-502	1/2b, I	3.03	37.9	Food	1994	U.S.	CP006594
FSL R2-503	1/2b, I	2.99	37.8	Human	1994	U.S.	AARR00000000
N1-011A	1/2b, I	3.01	37.9	Environment	N.A.	U.S.	CP006597
J1-108	4b, I	2.98	38.0	N.A.	2013	U.S.	NC_021825.1
F2365	4b, I	2.90	37.9	Human	1985	U.S.	AE017262.2
FSL R2-561	1/2c, II	2.97	38.0	N.A.	N.A.	N.A.	NC_017546
SLCC 2372	1/2c, II	2.97	38.0	N.A.	N.A.	N.A.	NC_018588
J2-031	1/2c, II	2.96	37.9	Human	1996	U.S.	CP006593

^aIsolate with a premature stop codon (PMSC) mutation in inlA
^bIsolate whose whole genome was sequenced in a previous study [62]
^cCerebrospinal fluid
^dCaused human death

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