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Table 1 Correlation between number of pseudogenes and host range of the respective organism

From: First complete genome sequence and comparative analysis of Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) indicates host adaptation traits to sheep

Serovar Host range ORFs Pseudogenes %
S. enterica subsp. enterica serovar Infantis FSIS1502916 Broad [26] 4407 206 4.67
S. enterica subsp. enterica serovar Agona SL483 Broad [27] 4444 213 4.79
S. enterica subsp. enterica serovar Schwarzengrund CVM19633 Broad [27] 4410 212 4.81
S. enterica subsp. enterica serovar Paratyphi B SPB7 Broad [27] 4549 220 4.84
S. enterica subsp. diarizonae serovar 60:r:z HZS154 Unknown 4689 228 4.86
S. enterica subsp. enterica serovar Typhimurium LT2 Broad [27, 28] 4504 220 4.88
S. enterica subsp. enterica serovar Heidelberg SL476 Broad [27] 4565 223 4.88
S. enterica subsp. diarizonae serovar 65:c:z SA20044251 Unknown 4461 218 4.89
S. enterica subsp. enterica serovar Newport SL254 Broad [27] 4489 220 4.90
S. enterica subsp. enterica serovar Enteritidis P125109 Broad [27] 4352 223 5.12
S. enterica subsp. diarizonae serovar 61:i:z NCTC10381 Unknown 4828 249 5.16
S. enterica subsp. diarizonae serovar 50:k:z MZ0080 Unknown 4684 245 5.23
S. enterica subsp. diarizonae serovar 60:r:z 11-01853 Unknown 4326 227 5.25
S. enterica subsp. enterica serovar Kentucky SA20030505 Bovine-adapted [28] 4427 242 5.47
S. enterica subsp. enterica serovar Dublin CT_02021853 Bovine-adapted [27, 28] 4580 261 5.70
S. enterica subsp. diarizonae serovar 61:k:1,5,(7) 16-SA00356 Sheep-adapted [5] 4461 269 6.03
S. enterica subsp. enterica serovar Paratyphi C RKS4594 Human-restricted [29] 4615 285 6.18
S. enterica subsp. enterica serovar Paratyphi A AKU_12601 Human-restricted [27, 28] 4340 281 6.47
S. enterica subsp. enterica serovar Paratyphi A ATCC 9150 Human-restricted [27, 28] 4337 281 6.48
S. enterica subsp. enterica serovar Choleraesuis SC-B67 Porcine-adapted [27] 4566 296 6.48
S. enterica subsp. enterica serovar Typhi CT18 Human-restricted [27, 28] 4665 307 6.58
S. enterica subsp. enterica serovar Typhi Ty2 Human-restricted [27, 28] 4621 314 6.80
S. enterica subsp. enterica serovar Pullorum ATCC 9120 Avian-restricted [29, 30] 4474 334 7.47
S. enterica subsp. enterica serovar Gallinarum 287/91 Avian-restricted [27, 28] 4453 336 7.55
  1. Host ranges were inferred from the literature (when available). The number of ORFs and pseudogenes was determined with Pseudofinder [17]. Only complete genome sequences were considered. Plasmid sequences were excluded from the analysis
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Gut Pathogens

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