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Table 1 List of primers used in this study

From: Characterization of Arcobacter strains isolated from human stool samples: results from the prospective German prevalence study Arcopath

PrimerSequence (5′-3′)Product size (bp)References
Genotyping
 ERIC 1RATG TAA GCT CCT GGG GAT TCA C Houf et al. [21]
 ERIC 2AAG TAA GTG ACT GGG GTG AGC G Houf et al. [21]
Detection of putative virulence genes
 cadF-FTTA CTC CTA CAC CGT AGT283Douidah et al. [25]
 cadF-RAAA CTA TGC TAA CGC TGG TT Douidah et al. [25]
 irgA-FTGC AGA GGA TGC TTG GAG CGT AAC T437Whiteduck-Leveillee et al. [40]
 irgA-RGTA TAA CCC CAT TGA TGA GGA GCA Whiteduck-Leveillee et al. [40]
 hecA-FGTG GAA GTA CAA CGA TAG CAG GCT C537Whiteduck-Leveillee et al. [40]
 hecA-RGTC TGT TTT AGT TGC TCT GCA GTC Whiteduck-Leveillee et al. [40]
 hecB-FCTA AAC TCT ACA AAT CGT GC528Whiteduck-Leveillee et al. [40]
 hecB-RCTT TTG AGT GTT GAC CTC Whiteduck-Leveillee et al. [40]
 pldA-FTTG ACG AGA CAA TAA GTG CAG C293Whiteduck-Leveillee et al. [40]
 pldA-RCGT CTT TAT CTT TGC TTT CAG GGA Whiteduck-Leveillee et al. [40]
 ciaB-FTGG GCA GAT GTG GAT AGA GCT TGG A284Whiteduck-Leveillee et al. [40]
 ciaB-RTAG TGC TGG TCG TCC CAC ATA AAG Whiteduck-Leveillee et al. [40]
 cj1349-FCCA GAA ATC ACT GGC TTT TGA G659Whiteduck-Leveillee et al. [40]
 cj1349-RGGG CAT AAG TTA GAT GAG GTT CC Whiteduck-Leveillee et al. [40]
 tlyA-FCAA AGT CGA AAC AAA GCG ACT G230Whiteduck-Leveillee et al. [40]
 tlyA-RTCC ACC AGT GCT ACT TCC TAT A Whiteduck-Leveillee et al. [40]
 mviN-FTGC ACT TGT TGC AAA ACG GTG294Whiteduck-Leveillee et al. [40]
 mviN-RTGC TGA TGG AGC TTT TAC GCA AGC Whiteduck-Leveillee et al. [40]
 iroE-FAAT GGC TAT GAT GTT GTT TAC415Karadas et al. [11]
 iroE-RTTG CTG CTA TGA AGT TTT Karadas et al. [11]
Detection of putative virulence genes with A. lanthieri specific primers
 AL_cdtB FGCA AAA GGT GAT TGG GCT CC303Zambri et al. [16]
 AL_cdtB RTCC TCC AGC TCC TTG AAC AC Zambri et al. [16]
 AL_cadF FTCC AAC TCC AGT TGC TGC TC243Zambri et al. [16]
 AL_cadF RTGT CCT TCG ATG TCA GCT TTC Zambri et al. [16]
 AL_irgA FAGA GCT GTT GGT TGG GAT GG186Zambri et al. [16]
 AL_irgA RTGC ATT TGC TCT TGT AGG GT Zambri et al. [16]
 AL_cdtC FGAT GAA TCC ACC AGA AAT AGA G196Zambri et al. [16]
 AL_cdtC RTTT GGG ATC AAG AGT ATA AAG TTC Zambri et al. [16]
 AL_pldA FTGC TCC ATT TAG AGA AAC TAA C132Zambri et al. [16]
 AL_pldA RGAA CGA GAT TCT TCA CCA TCT T Zambri et al. [16]
 AL_cdtA FCAG GAA TAG ATC TCG CTA CAA ATG220Zambri et al. [16]
 AL_cdtA RTTT GGT AGA AGA GGA AGT TCA TTG Zambri et al. [16]
 AL_mviN FACC TTT GGT TCT TCA ACT TTA C170Zambri et al. [16]
 AL_mviN RCGT GCT ACC ATA GGA AAT AGG Zambri et al. [16]
 AL_ciaB FGAT AGA TGC TAT TCT GCT CTT G207Zambri et al. [16]
 AL_ciaB RATC TTC ACT AAA TGC TAC TAT T Zambri et al. [16]
 AL_tlyA FGAC ATT GTA ACA TGT GAT GTA TCT T125Zambri et al. [16]
 AL_tlyA RTTT ACA TTT GTT CCC ACT TCA AA Zambri et al. [16]