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Table 1 Demographic details of the donors of diarrheal stool, the pathogen isolated, the most abundant phylum and Bacteroidetes/Firmicutes (B/F) ratio

From: Metagenomic analysis of gut microbiome and resistome of diarrheal fecal samples from Kolkata, India, reveals the core and variable microbiota including signatures of microbial dark matter

Sample ID

Sex

Age (Years (y)/Months (m))

Hospitalized (H)/OPD(O)

District/State

Pathogen isolated by culture

Most abundant phylum

B/F ratio

S1

Male

29y

O

24 Parganas

VC O1 Inaba

Proteobacteria

0.256637168

S2

Female

52y

O

24 Parganas

VC O1 Ogawa

Proteobacteria

0.788744975

S3

Male

36y

H (3 days)

Kolkata

EAEC,VC O1 Ogawa

Firmicutes

0.00844682

S4

Male

2y

O

24 Parganas

VC Non-O1 nonO139

Proteobacteria

0.042666667

S5

Male

11y

H (2 days)

24 Parganas

VC O1 Ogawa

Firmicutes

0.659106071

S6

Female

25y

H (1 day)

Kolkata

VC O1 Ogawa + E.coli (ETEC LTST)

Proteobacteria

0.105140187

S7

Female

43y

H (1 day)

Kolkata

VC Non-O1 nonO139

Firmicutes

0.02601605

S8

Male

22y

H (3 days)

Burdwan

VC O1 Inaba + Campylobacter sp.

Proteobacteria

0.901763224

S9

Male

16y

H (2 days)

Kolkata

VC O1 Ogawa + C.jejuni

Actinobacteria

0.02446675

S10

Male

55y

H (1 day)

Kolkata

UNRESOLVED

Firmicutes

0.119475005

S11

Female

56y

H (1 day)

Kolkata

VC O1 Ogawa

Firmicutes

0.01601553

S12

Male

12y

H (1 day)

Kolkata

VC O1 Ogawa

Firmicutes

0.681455898

S13

Male

40y

H (3 days)

Kolkata

VC O139

Bacteroidetes

1.157114228

S14

Male

50y

H (1 day)

Hooghly

VC O1 Ogawa

Firmicutes

0.023855673

S15

Male

1y

H (1 day)

Kolkata

Aeromonas sp.

Actinobacteria

1.536455818

S16

Female

8 m

O

Kolkata

Aeromonas sp.

Firmicutes

0.001056943

S17

Female

2y

O

Kolkata

S.flexeneri (UT)

Firmicutes

0.152137701

S18

Male

35y

H (2 days)

Bihar

VC O1 Ogawa

Proteobacteria

0.864882507

S19

Female

4y

H (1 day)

Kolkata

V.fluvialis

Firmicutes

0.745517928

S20

Male

42y

H (1 day)

Kolkata

VC O1 Ogawa

Firmicutes

0.043091111