Genus | Species under the corresponding genus | Samples carrying these species |
---|---|---|
Blastocatella sp. | ||
Actinomyces sp.* | ||
A. odontolyticus | S13, S7, S8 | |
A. graevenitzii | S7, S8, S14 | |
A. oris | S8 | |
Arcanobacterium sp. | ||
Bifidobacterium sp.* | ||
B. longum | S16, S9, S17, S15, S10 | |
B. ramosum | S16, S15 | |
B. secularae | S7 | |
B. bifidum | S17 | |
B. pullorum | S17 | |
B. sp. MRM 8. 19 | S2 | |
B. aerophilum | S15 | |
B. angulatum | S2, S9, S10, S15, S19, S17 | |
B. animalis | S15, S10 | |
B. avesanii | S15 | |
B. biavatii | S15 | |
B. sp. MC10 | S15, S17 | |
Corynebacterium sp.* | ||
C. falsenii | S3 | |
C. bovis | S16 | |
C. accolens | S8, S10, S13, S14 | |
C. kroppenstedtii | S9, S20, S10, S13 | |
C. cystitidis | S20 | |
C. sp. M72 | S10 | |
C. doosarense | S1 | |
C. simulans | S14 | |
C. sp. NML98-0116 | S16 | |
C. glaucum | S7 | |
C. sp. 1938BRRJ | S7, S11, S13, S14 | |
C. sp3210O2 | S7, S8 | |
C. sp. NML080024 | S7 | |
C. durum | S20 | |
Turicells sp. | ||
T. otidis | S1, S3, S4, S7, S14, S15, S20 | |
Dietzia sp. | ||
Rhodococcus sp. | ||
Brevibacterium sp. | ||
B. luteolum | S17 | |
Kytococcus sp. | ||
Candidatus Planktoluna sp. | ||
Microbacterium sp. | ||
Micrococcus sp. | ||
M. terreus | S14 | |
Rothia sp. | ||
R. dentocariosa | S7, S8, S11, S2, S13, S14 | |
R. aeria | S11 | |
R. sp. HMSC065C03 | S14 | |
Friedmanniella sp. | ||
Mamoricola sp. | ||
Cutibacterium sp. | ||
Streptomyces sp. | ||
S. sp. Q1 | S13, S14 | |
Libanicoccus sp. | ||
L. massiliensis | S18, S19, S9, S17, S12, S13 | |
Enterorhabdus sp. | ||
Slckia sp. | ||
S. hellotrinireducens | S15, S17, S20, S12, S10, S13 | |
Bacteroides sp.* | ||
B. plebius | S7, S10, | |
B. fragilis | S15, S19 | |
B. propionicifaciens | S10, S15 | |
B. sp. CAG:1060_57_27 | S5 | |
B. vulgatus | S10, S13 | |
B. acidifaciens | S13 | |
B. paurosaccharolyticus | S13 | |
Butyricimonas sp. | ||
Odoribacter sp. | ||
Porphyromonas sp. | ||
P. sp. oral taxon 278 K | S3 | |
Alloprevotella sp.* | ||
A. tannerae | S15, S20 | |
A. rava | S2, S5, S19, S13 | |
Prevotella sp. | ||
p. enoeca | S6, S11 | |
P. micans | S8 | |
P. sp. AN5135 | S15, S2 | |
P. copri | S19, S12, S2, S5, S13 | |
P. sp. oral clone ASCG10 | S19, S12 | |
P. sp. HJM029 | S12 | |
P. sp. 310-5 | S13 | |
P. marshii | S18, S7, S15, S19, S12, S2 | |
P. nigrescens | S8, S20, S11 | |
P. stercorea | S15, S19, S12, S5 | |
P. sp. 152R-1a | S19 | |
P. intermedia | S2 | |
P. sp. HUN102 | S2 | |
P. sp. oral cloneKWO35 | S2 | |
Parabacteroides sp. | ||
Flectobacillus sp. | ||
Bergeyella sp. | ||
B. sp. AF14 | S8 | |
Capnocytophaga sp. | ||
C. sputigena | S8 | |
C. ochracea | S11 | |
C. sp. oral clone ID062-W | S2 | |
Chryseobacterium sp. | ||
Deinococcus sp. | ||
D. geothermalis | S6 | |
Exiguobacterterium sp. | ||
Gemelia sp. | ||
G. sanguinis | S3, S8, S2, S14 | |
G. morbillorum | S8, S20 | |
Effusibacillus sp. | ||
Bacillus sp. | ||
Planococcus sp. | ||
Staphylococcus sp. | ||
S. haemolyticus | S14 | |
S. simulans | S14 | |
Aerococcus sp. | ||
A. vaginalis | S13, S20 | |
Dolosigranulum sp. | ||
Granulicatella sp. | ||
G. sp. BB-11 | S8, S20, S11, S14 | |
G. sp. canine oral taxon O95 | S14 | |
Enterococcus sp. | ||
E. faecium | S16 | |
E. italicus | S11, S14 | |
E. xinjiangensis | S16 | |
E. casseliflavus | S10 | |
E. hermanniensis | S10 | |
E. durans | S10 | |
Lactobacillus sp.* | ||
L. coryniformis | S11 | |
L. satsumensis | S14 | |
Lactococcus sp. | ||
Streptococcus sp.* | ||
S. agalactiae | S2, S6, S3, S7, S8, S11, S10, S14 | |
S. pneumoniae | S8, S17, S11, S2, S10, S1, S14 | |
S. parasanguinis | S2, S5, S6, S3, S7, S8, S11, S10, S13, S14, S17, S20 | |
S. anginosus | S18, S3, S4, S7, S8, S17, S20, S2, S10, S13, S14 | |
S. dannielliae | S18, S3, S4, S16, S20, S11, S12, S2, S10 | |
S. ferus | S18 | |
S. pantholopis | S3 | |
S. sp. oral clone ASCB12 | S3, S7, S8, S17, S20, S11, S10, S14 | |
S. sp. oral taxon GS9 | S3, S11, S14 | |
S. didelphis | S16 | |
S. equinus | S4 | |
S. parasuis | S16 | |
S. sanguinis | S7, S8, S17, S14 | |
S. sp. DD04(2016) | S7, S11, S14 | |
S. sinensis | S7 | |
S. sp. XJ149-N32 | S7, S8, S11, S2, S14 | |
S. vestibularis | S7, S8, S17, S11 | |
S. mutans | S20 | |
S. cristatus | S8, S20, S14 | |
S. equi | S10, S14 | |
S. gordonii | S14 | |
S. mitis | S14 | |
Clostridium sp.* | ||
C. magnum | S1, S2, S3, S4, S15, S17, S18, S19, S20 | |
C. sp. Marseille | S15, S19, S19, S12 | |
C. sp. CE6 | S19, S5, S10, S13 | |
C. sp. CAG:288 | S12 | |
C. sp. Culture-Jar-56 | S5 | |
Lutispora sp. | ||
Fusibacter sp. | ||
Mogibacterium sp. | ||
Alkalibacter sp. | ||
Agathobacter sp. | ||
Anaerosporobacter sp. | ||
Anaerostipes sp. | ||
Blautia sp.* | ||
B. massiliensis | S18, S19, S9, S20, S2, S5, S10, S13 | |
B. hydrogenotrophica | S10, S13 | |
B. stercosis | S13 | |
Catonella sp. | ||
Dorea sp. | ||
D. formicigenerans | S7, S19, S9, S17, S20, S12, S5, S10 | |
D. longicatena | S2, S19 | |
Lachnoclostridium sp. | ||
[Clostridium]polysaccharolyticum | S15 | |
Roseburia sp. | ||
R. hominis | S6, S17, S2, S5 | |
R. sp. 1120 | S9, S10 | |
Shuttleworthia sp. | ||
Stomatobaculum sp. | ||
Oscilibacter sp. | ||
Desulfotomaculum sp. | ||
Peptostreptococcus sp.* | ||
Faecalibacterium sp.* | ||
F. prausnitzii | S2, S12, S18, S19, S20 | |
Fastidiosipila sp. | ||
Ruminiclostridium sp. | ||
Eubacterium siraeum | S18, S19, S20, S12, S13 | |
Clostridium leptum | S19, S20, S12, S5 | |
Ruminococcus sp. | ||
R. sp. CE2 | S16, S15, S19, S2, S10, S13 | |
R. sp. YE58 | S15, S9, S10 | |
R. sp. RLB3 | S9, S12 | |
R. sp. W22 | S9, S17, S10, S13 | |
R. sp. 653 | S17 | |
R. bromii | S12, S5 | |
R. sp. YE281 | S12 | |
R. sp. ID1 | S2 | |
R. gauvreaucii | S5 | |
R. sp. Marseille-P328 | S13 | |
Subdoligranulum sp. | ||
Dethiobacter sp. | ||
Catenibacterium sp. | ||
C. mitsuokai | S18, S7, S15, S19, S9, S5, S17 | |
Holdemanella sp.* | ||
Solobacterium sp. | ||
Turicibacter sp. | ||
Phascolarctobacterium sp. | ||
P. sp. 377 | S17 | |
P. sp. canine oral taxon 212 | S17, S5 | |
Megamonas sp. | ||
Dialister sp.* | ||
D. sp. 67 | S18, S8, S15, S19, S9, S17, S20, S12, S2, S10, S13 | |
D. succinatiphilus | S17 | |
Veillonella sp. | ||
V. sp. oral clone OH1A | S3, S8, S20, S10, S13.S14 | |
V. sp. oral taxon 780 | S8, S2, S13 | |
V. atypica | S17, S13 | |
V. sp. 2011-11eoVSA-F2 | S17 | |
V. magna | S20 | |
Anaerococcus sp. | ||
A. sp. S138 | S4 | |
A. prevotii | S16 | |
A. sp. S194 | S16 | |
A. octavius | S7 | |
Peptoniphilus sp. | ||
Fusobacterium sp. | ||
F. nucleatum | S11 | |
F. russii | S2 | |
Leptotricha sp. | ||
L. sp. oral clone FP036 | S11 | |
L. sp. oral taxon 212 | S11, S2, S14 | |
L. sp. oral taxon 847 | S11, S2 | |
L. buccalis | S14 | |
Streptobacillus sp. | ||
S. hongkonggensis | S6, S20 | |
Brevundimonas sp. | ||
Methylobacterium sp.* | ||
Paracoccus sp. | ||
Actererythrobacter sp. | ||
Novosphingobium sp. | ||
Sphingomonas sp. | ||
Lautropia sp. | ||
L. mirabilis | S2, S6, S11, S13, S14 | |
Ralstonia sp. | ||
Parasutterella sp. | ||
P. excrementihominis | S10 | |
Sutterella sp. | ||
S. sp. YIT-12072 | S7, S5 | |
Neisseria sp.* | ||
N. meningitidis | S18, S19, S20 | |
N. shayeganii | S18, S19, S20 | |
N. elongata | S11, S14 | |
N. flavescens | S11 | |
N. lactamica | S2 | |
Simonsiella sp. | ||
Campylobacter sp. | ||
C. faecalis | S18 | |
C. concisus | S11 | |
Helicobacter sp. | ||
H. pylori | S2, S6, S7, S11, S14, | |
Shewanella sp. | ||
Rheinheimera sp. | ||
Buttiauxella sp. | ||
Candidatus Benitsuchiphilus sp. | ||
Candidatus Blochmannia sp. | ||
Citrobacter sp. | ||
C. amalonaticus | S10 | |
Eschericia sp. | ||
E. coli | S1, S2, S3, S4, S6, S8, S10, S11, S13, 16, S17, S19, S20 | |
E. albertii | S1, S2, S4, S6, S10, S11, S13, S20 | |
E. sp. | S1, S11 | |
Klebsiella sp. | ||
K. sp. A4 | S1, S2, S6, S13, S18 | |
K. pneumoniae | S4, S7, S10 | |
K. aerogenes | S7 | |
Shigella sp. | ||
S. dysenteriae | S6, S11 | |
S. sonnei | S6, S10, S16 | |
Shimwella sp. | ||
Xenorhabdus sp. | ||
Brenneria sp. | ||
B. sp. DAF NE_Bnig-1 | S4 | |
B. populi | S10 | |
Dickeya | ||
Serratia sp | ||
S. marcescens | S3, S11 | |
Alcanivorax sp. | ||
Halomonas sp. | ||
Aggregatibacter sp. | ||
Haemophilus sp. | ||
H. haemolyticus | S4, S6, S8 | |
H. parainfluenzae | S4, S8, S14 | |
H. pittmaniae | S8 | |
H. sp. oral clone BJ021 | S17 | |
H. sputorum | S11, S17 | |
H. influenzae | S1 | |
Acinetobacter sp.* | ||
A. baumanii | S19 | |
A. sp. | S19 | |
A. calcoaceticus | S12 | |
Moraxella sp. | ||
M. osloensis | S6, S7 | |
Pseudomonas sp. | ||
P. putida | S1 | |
Vibrio sp.* | ||
V. cholerae | S1, S2, S5, S6, S8, S9, S11, S12, S15, S17, S18, S19, S20 | |
V. metoecus | S18, S13, S14 | |
V. neptunius | S18 | |
V. proteolyticus | S18 | |
V. parahaemolyticus | S13 | |
V. sp. NJ-2 | S13 | |
Treponema sp. | ||
T. pectinovorum | S20 | |
T. berlinense | S5 | |
Fretibacterium sp. | ||
Mycoplasma | ||
M. muris | S10 | |
Akkermansia sp.* | ||
A. muciniphila | S5, S6, S7, S8, S13, S15, S16, S18, S19, S20 | |
A. glycaniphila | S5 | |
Mobiluncus sp. | ||
Gardnerella sp. | ||
Mycobacterium sp. | ||
Brachybacterium sp. | ||
Serinicoccus sp. | ||
Glutamibacter sp. | ||
Kocuria sp. | ||
Nesterenkonia sp. | ||
Propioniciclava sp. | ||
P. sp. SCSIO_13291 | S18 | |
Atopobium sp. | ||
Olsenella sp. | ||
Collinsella sp. | ||
C. aerofaciens | S18, S4, S16, S8, S15, S19, S9, S17, S20, S11, S12, S2, S5, S10, S1 | |
C. bouchesdurhonensis | S15, S18, S19, S9, S17, S20, S12, S14 | |
C. ihuae | S18, S15, S19, S9, S17, S20, S12, S14 | |
C. sp. Marseille-P3740 | S15, S9, S17, S20 | |
C. phocaeensis | S17 | |
Senegalimassilea sp. | ||
Gaiella sp. | ||
Paludibacter sp. | ||
P. jiangxiensis | S11, S16, S18 | |
Macellibacteroides sp. | ||
Massiiprevotella sp. | ||
M. massiliensis | S1, S2, S5, S9, S12, S18, S19, S20 | |
Prevotellamassilia sp | ||
P. timonensis | S18, S19, S17, S20, S12, S2, S10 | |
Alistipes sp. | ||
A. finegoldii | S15 | |
Empedobacter sp. | ||
Arcticibacter sp. | ||
Sphingobacterium sp. | ||
S. sp. JAS3 | S19, S20 | |
Microcystis sp. | ||
M. sp. SAG43. 90 | S18 | |
Elusimicrobium sp. | ||
E. minutum | S12 | |
Fibrobacter sp. | ||
Lactobacillalis bacterium HY-36-1) | ||
Weissella sp. | ||
Howardella sp. | ||
H. ureilytica | S2 | |
Intestimonas sp. | ||
Christensenella sp. | ||
C. massiliensis | S5, S19 | |
Butyricoccus sp. | ||
B. faecihominis | S9, S17, S20, S13 | |
Oxobacter sp. | ||
Acidaminobacter sp. | ||
Anaerofustis sp. | ||
Eubacterium sp. | ||
E. coprostanoligenes | S18, S19, S20 | |
E. eligens | S2, S5, S10, S12, S17, S18, S19, S20 | |
E. sp. oral clone DO 016 | S3, S7, S8 | |
E. sp. oral clone FX028 | S7, S14 | |
E. pyruvativorans | S12 | |
E. sp. oral clone El074 | S14 | |
Butyrivibrio | ||
B. crossotus | S12, S18, S19, S20 | |
Eisenbergiella sp. | ||
Fusicatenibacter sp. | ||
Lachnospira sp. | ||
Marvinbryantia sp. | ||
M. formatexigens | S20, S13 | |
Moryella sp. | ||
Oribacterium sp. | ||
Tyzzerella sp. | ||
Peptococcus sp. | ||
Romboutsia sp. | ||
Candidatus soleaferrea | ||
Fournierella sp. | ||
Negativibacillus sp. | ||
Papillibacter sp. | ||
Phocea sp. | ||
Saccharofermentans sp. | ||
S. acetigenes | S20 | |
Sporobacter sp. | ||
Dielma sp. | ||
Erysipelothrix sp. | ||
E. larvae | S7 | |
Anaerovibrio sp. | ||
Mitsuokella sp. | ||
Selemonas sp. | ||
S. sputigena | S20 | |
S. noxia | S11 | |
Sporomusa sp. | ||
Allisonella sp. | ||
A. histaminiformans | S19, S9, S17, S12, S2 | |
Megasphaera sp. | ||
M. micronuciformis | S13 | |
Finegoldia sp. | ||
Parvimonas sp. | ||
Cetobacterium sp. | ||
Craurococcus sp. | ||
Roseomonas sp. | ||
Candidatus Alysiosphaera | ||
Sphaerotilus sp. | ||
S. natans | S9 | |
Comamonas sp. | ||
C. aquatica | S12 | |
C. testosteroni | S12 | |
Diaphorobacter sp. | ||
Oxalobacter sp. | ||
O. formigenes | S18, S19, S10 | |
Eikenella sp. | ||
Kingella sp. | ||
K. genomosp. P1 oral clone MB2_C20 | S11 | |
Thiobacillus sp. | ||
Azonexus sp. | ||
Zoogloea sp. | ||
Desulfomicrobium sp. | ||
D. baculatum | S18, S3, S4, S15, S19, S17, S20, S2, S5, S1, S14 | |
Bilophila sp. | ||
Desulfovibrio sp. | ||
D. putealis | S3, S4, S15, S17, S2, S1, S14 | |
D. sp. enrichment clone JdgSrb011 | S11 | |
Mailhella sp. | ||
M. massiliensis | S18, S19, S20, S12 | |
Pelobacter sp. | ||
Geobacter sp. | ||
Arcobacter sp. | ||
Sulfurospirillum sp. | ||
S. deleyianum | S2, S17, S20 | |
Aeromonas sp. | ||
Anaerobiospirillum sp. | ||
Ruminobacter sp. | ||
Succinivibrio sp | ||
S. dextrinosolvens | S18, S19 | |
Plesiomonas sp. | ||
Cronobacter sp. | ||
Buchnera sp. | ||
B. aphidicola | S18 | |
Edwardsiella sp. | ||
Morganella sp. | ||
Methyloparacoccus sp. | ||
Actinobacillus sp. | ||
Aliivibrio sp. | ||
Lysobacter sp. | ||
Stenotrophomonas sp. | ||
Bacteriovorax sp. | ||
Peredibacter sp. | ||
Brachyspira sp. | ||
Asteroleplasma sp. | ||
Gordonia sp. | ||
Tessaracoccus sp. | ||
Candidatus Saccharimonas | ||
Listeria sp. | ||
L. floridensis | S16 | |
Abiotrophia sp. | ||
A. defectiva | S1, S2, S3, S8, S17, S20, S11, S13, S14 | |
Facklamia sp. | ||
Ignavigranum sp. | ||
Melissococcus sp. | ||
Pilibacter sp. | ||
Leuconostoc sp. | ||
Epulopiscium sp. | ||
Anaerovorax sp. | ||
Johnsonella sp. | ||
J. ignava | S14 | |
Clostridioides | ||
C. difficile | S3, S8 | |
Halanaerobium sp. | ||
Anaeroglobus sp. | ||
Murdochiella sp. | ||
Ignavibacterium sp. | ||
Magnetococcus sp. | ||
Vogesella sp. | ||
Marinobacter sp. | ||
Franconibacter sp. | ||
F. pulveris | S1, S3, S11 | |
Pantoea sp. | ||
P. agglomerans | S4 | |
P. conspicua | S16 | |
P. sp. R21 | S14 | |
Coxiella sp. | ||
Ureaplasma sp. | ||
Varibaculum sp. | ||
Lawsonella sp. | ||
L. clevelandensis | S7 | |
Williamsia sp. | ||
Arthrobacter sp. | ||
Saccharopolyspora sp. | ||
Flavobacterium sp. | ||
F. caeni | S2 | |
Moheibacter sp. | ||
Alkaliphilus sp. | ||
A. sp. LacT | S11 | |
Acetobacterium sp. | ||
A. woodii | S11 | |
Desulfosporosinus sp. | ||
Anaerotruncus sp. | ||
Negativicoccus sp. | ||
Fimbriiglobus sp. | ||
Haliangium sp. | ||
Enterobacter sp. | ||
E. cloacae | S10 | |
E. hormaechei | S1 | |
Salmonella sp. | ||
S. enterica | S11 | |
Erwinia sp. | ||
E. teleogrylli | S16 | |
Proteus sp. | ||
P. mirabilis | S14 | |
Sodalis sp. | ||
Hahella sp. | ||
H. ganghwensis | S4 | |
Phocoenobacter sp. | ||
Perlucidibaca sp. | ||
Luteimonas sp. | ||
Arcella sp. | ||
A. hemisphaerica | S1, S4 | |
Bryobacter sp. | ||
Aurantimicrobium sp. | ||
Huakuichenia sp. | ||
Propionimicrobium sp. | ||
Emticicia sp. | ||
Cloacibacterium sp. | ||
Salinicoccus sp. | ||
Proteiniclasticum sp. | ||
Ethanoligenens sp. | ||
Ezakiella sp. | ||
Gallicola sp. | ||
Helcococcus sp. | ||
H. sueciensis | S7 | |
Limnobacter sp. | ||
Dechloromonas sp. | ||
Propionivibrio sp. | ||
Acidibacter sp. | ||
Nocardia sp. | ||
Pseudopropionibacterium sp. | ||
Barnesiella sp. | ||
Culturomica sp. | ||
Hydrogenispora sp. | ||
Atopococcus sp. | ||
Catellicoccus sp. | ||
Fenollaria sp. | ||
F. timonensis | S7 | |
Neofamilia sp. | ||
N. massiliensis | S7 | |
Sarcina sp. | ||
Acetoanaerobium sp. | ||
Bulleidia sp. | ||
B. extructa | S8 | |
Candidatus Stoquefichens | ||
Coprobacillus sp. | ||
Erysipelatoclostridium sp. | ||
Sedimentibacter sp. | ||
Aureimonas sp. | ||
Aquabacterium sp. | ||
Paraburkholderia sp. | ||
Massilia sp. | ||
Candidatus Babela | ||
Cardiobacterium sp. | ||
Legionella sp. | ||
Bdellovibrio sp. | ||
B. sp. SRP1 | S9 | |
Illumatobacter sp. | ||
Acidothermus sp. | ||
Haloactinopolyspora sp. | ||
Quadrisphaera sp. | ||
Georgenia sp. | ||
Cellulomonas sp. | ||
Dermabacter sp. | ||
Pseudoclavibacter sp. | ||
Nocardioides sp. | ||
N. sp. N37 | S15 | |
Eggerthella sp. | ||
Roultibacter sp. | ||
R. timonensis | S8, S20 | |
Rubrobacter sp. | ||
Dysgonomonas sp. | ||
Tannerella sp. | ||
T. forsythia | S8, S2, S1 | |
Asinibacterium sp. | ||
Sediminibacterium sp. | ||
S. sp. LT21-MRL | S8 | |
Marinoscilum sp. | ||
Neochlamydia sp. | ||
Paenibacillus sp. | ||
Eremococcus sp. | ||
Lacticigenium sp. | ||
L. naphtae | S8, S17, S20, S11, S10, S14 | |
Tetragenococcus sp. | ||
Vagococcus sp. | ||
Lachnoanaerobaculum sp. | ||
Filibacter sp. | ||
F. alocis | S14 | |
Eggerthia sp. | ||
E. catenaformis | S8, S14 | |
Hyphomicrobium sp. | ||
Candidatus Ovatusbacter sp | ||
Cellvibrio sp. | ||
Yersinia sp. | ||
Psychrobacter sp. | ||
Pseudoxanthomonas sp. | ||
Thermomonas sp. | ||
Candidatus Ancillula sp. | ||
Aeriscardovia sp. | ||
Pseudoscardovia sp. | ||
Candidatus Aquiluna sp. | ||
Candidatus Limnoluna sp. | ||
Haematomicrobium sp. | ||
Nakamurella sp. | ||
Dinghuibacter sp. | ||
Pasteuria sp. | ||
Alloiococcus sp. | ||
Flavonifractor sp. | ||
F. plautii | S15, S17 | |
Caloranaerobacter sp. | ||
Caminicella sp. | ||
Syntrophococcus sp. | ||
Coprothermobacter sp. | ||
Singulisphaera sp. | ||
Pirellula sp. | ||
Plantoptrus sp. | ||
Devosia sp. | ||
Amaricoccus sp. | ||
Reyranella sp. | ||
Thiomonas sp. | ||
Undibacterium sp. | ||
Duodenibacillus sp. | ||
D. massiliensis | S12 | |
Desulfobulbus sp. | ||
Pajaroellobacter sp. | ||
Mariprofundus sp. | ||
Luteolibacter sp. | ||
Verrucomicrobium sp. | ||
Holophaga sp. | ||
H. foetida | S19 | |
Acidimicrobium sp. | ||
Cellulosimicrobium sp. | ||
Rikenella sp. | ||
Marinifilum sp. | ||
Candidatus Latescibacter sp. | ||
Trichococcus sp. | ||
Colidextribacter sp. | ||
C. massiliensis | S19, S20 | |
Proteiniborus sp. | ||
Caloramator sp. | ||
Hungatella sp. | ||
Acetitomaculum sp. | ||
A. ruminis | S10, S14 | |
Cellulosilyticum sp. | ||
Herbinix sp. | ||
Robinsoniella sp. | ||
Sellimonas sp. | ||
Peptoclostridium sp. | ||
Acetivibrio sp. | ||
Anaerofilum sp. | ||
Hydrogenoanaerobacterium sp. | ||
Oscillospira sp. | ||
Catenisphaera sp. | ||
Dubosiella sp. | ||
D. newyorkensis | S19 | |
Schwartzia sp. | ||
Gottschalkia sp. | ||
Victivallis sp. | ||
Candidatus Paracaedibacter sp. | ||
Enhydrobacter sp. | ||
Komagataeibacter sp. | ||
Ideonella sp. | ||
Acidovorax sp. | ||
Alicycliphilus sp. | ||
Delftia sp. | ||
Alysiella sp. | ||
Vitreoscilla sp. | ||
V. stercoraria | S5 | |
Dechlorobacter sp. | ||
Azoarcus sp. | ||
Thauera sp. | ||
Geothermobacter sp. | ||
Succinatimonas sp. | ||
Pseodoalteromonas sp. | ||
Psychromonas sp. | ||
Woeseia sp. | ||
Candidatus Rosenkranzia | ||
Marinomonas sp. | ||
Alkanindiges sp. | ||
Candidatus Parabeggiatoa sp. | ||
Dokdonella sp. | ||
Piscicoccus sp. | ||
Agromyces sp. | ||
Sanguibacter sp. | ||
Sanguibacteroides sp. | ||
Enorma sp. | ||
Paraeggerthella sp. | ||
Nubsella sp. | ||
Pedobacter sp. | ||
P. terricola | S9 | |
Caldicoprobacter sp. | ||
Lactonifactor sp. | ||
Coprococcus sp. | ||
C. catus | S9, S5 | |
Pseudobutyrivibrio sp. | ||
P. sp. CA38 | S9 | |
Faecalibaculum sp. | ||
Faecalitalea sp. | ||
Merdibacter sp. | ||
Gemmatirosa sp. | ||
Microvirga sp. | ||
Candidatus Thiosymbion sp. | ||
Oblitimonas sp. | ||
Alloscardovia sp. | ||
Leucobacter sp. | ||
Longispora sp. | ||
Acetatifactor sp. | ||
Cryptanaerobacter sp. | ||
Breznakia sp. | ||
Succiniclasticum sp. | ||
Sneathia sp. | ||
Kaistia sp. | ||
K. sp. TBD058 | S17 | |
Hellea sp. | ||
Pseudoruegeria sp. | ||
P. marunistellae | S17 | |
Erythrobacter sp. | ||
Candidatus Accumulibacter sp. | ||
Rhodoferax sp. | ||
Anaeromyxobacter sp. | ||
Mannheimia sp. | ||
M. haemolytica | S17 | |
Mesocricetibacter sp. | ||
Fluviicoccus sp. | ||
Photobacterium sp. | ||
Dermacoccus sp. | ||
Dactylosporangium sp. | ||
Propionibacterium sp. | ||
Coriobacterium sp. | ||
Cryptobacterium sp. | ||
Gordonibacter sp. | ||
Phocoeicola sp. | ||
Rufibacter sp. | ||
Truepera sp. | ||
Desulfuribacillus sp. | ||
Oceanobacillus sp. | ||
Sporosarcina sp. | ||
Marinilactibacillus sp. | ||
M. sp. G13. 51 | S13 | |
Candidatus Arthromitus sp. | ||
Guggenheimella sp. | ||
Proteocatella sp. | ||
Terrisporobacter sp. | ||
Quinella sp. | ||
Acidaminococcus sp. | ||
Anaerospora sp. | ||
Dethiosulfatibacter sp. | ||
Tissierella sp. | ||
Asticcacaulis sp. | ||
Sphingobium sp. | ||
tepidomonas sp. | ||
Halioglobus sp. | ||
Candidatus Stammerula sp. | ||
Izhakiella sp. | ||
Pectobacterium sp. | ||
Aquicella sp. | ||
Scardovia sp. | ||
S. inopinata | S20 | |
Luedemannella sp. | ||
Rosemarinus sp. | ||
Maritimimonas sp. | ||
Bavariicoccus sp. | ||
B. seileri | S11, S14 | |
Bradyrhizobium sp. | ||
Rhizobium sp. | ||
Burkholderia sp. | ||
Candidatus Glomeribacter sp. | ||
Polynucleobacter sp. | ||
Curvibacter sp. | ||
Conchiformibius sp. | ||
Snodgrassella sp. | ||
Stenoxybacter sp. | ||
Tolumonas sp. | ||
Idiomarina sp. | ||
Photorhabdus sp. | ||
Chromohalobacter sp. | ||
Balneatrix sp. | ||
Oleispira sp. | ||
Galeibacterium sp. | ||
Pasteurella sp. | ||
P. muttocida | S11 | |
Anaerocella sp. | ||
Myroides sp. | ||
Jeotgalicoccus sp. | ||
Pseudoflavonifractor sp. | ||
Thermobrachium sp. | ||
Mobilitalea sp. | ||
Marseilibacter sp. | ||
M. massiliensis | S5, S12 | |
Paeniclostridium sp. | ||
Anaerobacterium sp. | ||
Holdemania sp. | ||
Pedomicrobium sp. | ||
Rubellimicrobium sp. | ||
Rivibacter sp. | ||
Alcaligenes sp. | ||
Sulfurimonas sp. | ||
Pseudohongiella sp. | ||
Zobellella sp. | ||
Thiorhodovibrio sp. | ||
Providencia sp. | ||
neptunomonas sp. | ||
Azotobacter sp. | ||
Thiopseudomonas sp. | ||
Beggiatoa sp. | ||
Arenimonas sp. | ||
Anaeroplasma sp. | ||
Chlamydia sp. | ||
Pectinatus sp. | ||
Candidatus Gullanella sp. | ||
Orbus sp. | ||
achromatium sp. | ||
Fermentimonas sp. | ||
Nitribacter sp. | ||
Natranaerovirga sp. | ||
Parasporobacterium sp. | ||
P. paucivorans | S5 | |
Acetanaerobacterium sp. | ||
Angelakisella sp. | ||
A. massiliensis | S5 | |
Ercella sp. | ||
Pygmaiobacter sp. | ||
Thermodesulfovibrio sp. | ||
Caulobacter sp. | ||
Candidatus hamiltonella sp. | ||
Pyramidobacter sp. | ||
Luteipulveratus sp. | ||
Aestuarlimicrobium sp. | ||
A. kwangyangense | S10 | |
Spirosoma sp. | ||
Acidibacillus sp. | ||
Sinibacillus sp. | ||
Solibacillus sp. | ||
Carnobacterium sp. | ||
Constrictibacter sp. | ||
Endozoicomonas sp. | ||
Kistimonas sp. | ||
Oleiphilus sp. | ||
Synergistes sp. | ||
Ornithinimicrobium sp. | ||
Pseudonocardia sp. | ||
Phoenicibacter sp. | ||
Cytophaga sp. | ||
Alsobacter sp. | ||
Rhodobacter sp. | ||
Magnetospira sp. | ||
Paraglaciecola sp. | ||
Candidatus Purcelliella sp. | ||
P. pentastirinorum | S1 | |
Kosakonia sp. | ||
Candidatus Schmidhempelia sp. | ||
Parviterribacter sp. | ||
Haoranjiania sp. | ||
Hathewaya sp. | ||
Acidiphilum sp. | ||
Sulfurirhabdus sp. | ||
Candidatus Regiella sp. | ||
Ammoniibacillus sp. | ||
Macrococcus sp. | ||
Thermoactinomyces sp. | ||
Jeotgalibaca sp. | ||
Phenylobacterium sp. | ||
Cupriavidus sp. | ||
Methyloversatalis sp. | ||
Desulfuromonas sp. | ||
Ferrimonas sp. | ||
Vulcaniibacterium sp. |