TY - JOUR AU - Abdellatif, A. M. AU - Jensen Smith, H. AU - Harmas, R. Z. AU - Sarvetnick, N. E. PY - 2019 DA - 2019// TI - Human islet response to selected type 1 diabetes-associated bacteria: a transcriptome-based study JO - Front Immunol. UR - https://doi.org/10.3389/fimmu.2019.02623 DO - 10.3389/fimmu.2019.02623 ID - Abdellatif2019 ER - TY - JOUR AU - Aguayo-Patrón, S. AU - Castillo-Fimbres, R. AU - Quihui-Cota, L. AU - Calderón de la Barca, A. M. PY - 2017 DA - 2017// TI - Use of real-time polymerase chain reaction to identify Entamoeba histolytica in schoolchildren from northwest Mexico JO - J Infect Dev Ctries. UR - https://doi.org/10.3855/jidc.9350 DO - 10.3855/jidc.9350 ID - Aguayo-Patrón2017 ER - TY - JOUR AU - Aguayo-Patrón, S. AU - Beltrán-Sauceda, L. AU - Calderón de la Barca, A. M. PY - 2016 DA - 2016// TI - A population-wide applicable HLA-DQ2 and DQ8 genotyping using DNA from dried blood spots and duplex allele-specific qPCR amplification JO - Scand J Clin Lab Invest VL - 76 UR - https://doi.org/10.1080/00365513.2016.1230773 DO - 10.1080/00365513.2016.1230773 ID - Aguayo-Patrón2016 ER - TY - JOUR AU - Andersen, L. O. AU - Bonde, I. AU - Nielsen, H. B. AU - Stensvold, C. R. PY - 2015 DA - 2015// TI - A retrospective metagenomics approach to studying Blastocystis JO - FEMS Microbiol Ecol UR - https://doi.org/10.1093/femsec/fiv072 DO - 10.1093/femsec/fiv072 ID - Andersen2015 ER - TY - JOUR AU - Audebert, C. AU - Even, G. AU - Cian, A. AU - Loywick, A. AU - Merlin, S. PY - 2016 DA - 2016// TI - Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota JO - Sci Rep. VL - 1 UR - https://doi.org/10.1038/srep25255 DO - 10.1038/srep25255 ID - Audebert2016 ER - TY - JOUR AU - Bednarska, M. AU - Jankowska, I. AU - Pawelas, A. AU - Piwczynska, K. AU - Bajer, A. AU - Wolska-Kusnierz, B. PY - 2018 DA - 2018// TI - Prevalence of Cryptosporidium, Blastocystis, and other opportunistic infections in patients with primary and acquired immunodeficiency JO - Parasitol Res UR - https://doi.org/10.1007/s00436-018-5976-6 DO - 10.1007/s00436-018-5976-6 ID - Bednarska2018 ER - TY - JOUR AU - Cabrera-Chávez, F. AU - Rouzaud-Sández, O. AU - Sotelo-Cruz, N. AU - Calderón de la Barca, A. M. PY - 2009 DA - 2009// TI - Bovine milk caseins and transglutaminase-treated cereal prolamins are differentially recognized by IgA of celiac disease patients according to their age JO - J Agric Food Chem UR - https://doi.org/10.1021/jf802596g DO - 10.1021/jf802596g ID - Cabrera-Chávez2009 ER - TY - JOUR AU - Caporaso, J. G. AU - Kuczynski, J. AU - Stombaugh, J. AU - Bittinger, K. AU - Bushman, F. D. AU - Costello, E. K. PY - 2010 DA - 2010// TI - QIIME allows analysis of high-throughput community sequencing data JO - Nat Methods UR - https://doi.org/10.1038/nmeth.f.303 DO - 10.1038/nmeth.f.303 ID - Caporaso2010 ER - TY - JOUR AU - Cinek, O. AU - Kramna, L. AU - Lin, J. AU - Oikarinen, S. AU - Kolarova, K. AU - Ilonen, J. PY - 2017 DA - 2017// TI - Imbalance of bacteriome profiles within the Finnish Diabetes Prediction and Prevention study: parallel use of 16S profiling and virome sequencing in stool samples from children with islet autoimmunity and matched controls JO - Pediatr Diabetes UR - https://doi.org/10.1111/pedi.12468 DO - 10.1111/pedi.12468 ID - Cinek2017 ER - TY - JOUR AU - Edling, L. AU - Rathsman, S. AU - Eriksson, S. AU - Bohr, J. PY - 2012 DA - 2012// TI - Celiac disease and giardiasis: a case report JO - Eur J Gastroenterol Hepatol UR - https://doi.org/10.1097/MEG.0b013e328354f3f5 DO - 10.1097/MEG.0b013e328354f3f5 ID - Edling2012 ER - TY - JOUR AU - Freire, R. AU - Ingano, L. AU - Serena, G. AU - Cetinbas, M. AU - Anselmo, A. AU - Sapon, A. PY - 2019 DA - 2019// TI - Human gut derived-organoids provide model to study gluten response and effects of microbiota derived molecules in celiac disease JO - Sci Rep. UR - https://doi.org/10.1038/s41598-019-43426-w DO - 10.1038/s41598-019-43426-w ID - Freire2019 ER - TY - JOUR AU - Grabensteiner, E. AU - Hess, M. PY - 2006 DA - 2006// TI - PCR for the identification and differentiation of Histomonas meleagridis, Tetratrichomonas gallinarum and Blastocystis spp JO - Vet Parasitol UR - https://doi.org/10.1016/j.vetpar.2006.07.011 DO - 10.1016/j.vetpar.2006.07.011 ID - Grabensteiner2006 ER - TY - JOUR AU - Hagopian, W. AU - Lee, H. S. AU - Liu, E. AU - Rewers, M. AU - She, J. -. X. AU - Ziegler, A. -. G. PY - 2017 DA - 2017// TI - Co-occurrence of Type 1 Diabetes and Celiac Disease Autoimmunity JO - Pediatrics UR - https://doi.org/10.1542/peds.2017-1305 DO - 10.1542/peds.2017-1305 ID - Hagopian2017 ER - TY - JOUR AU - Hänninen, A. AU - Toivonen, R. AU - Pöysti, S. AU - Belzer, C. AU - Plovier, H. AU - Ouwerkerk, J. P. PY - 2018 DA - 2018// TI - Akkermansia muciniphila induces gut microbiota remodeling and controls islet autoimmunity in NOD mice JO - Gut UR - https://doi.org/10.1136/gutjnl-2017-314508 DO - 10.1136/gutjnl-2017-314508 ID - Hänninen2018 ER - TY - JOUR AU - Hansen, C. H. AU - Krych, L. AU - Nielsen, D. S. AU - Vogensen, F. K. AU - Hansen, L. H. AU - Sorensen, S. J. PY - 2012 DA - 2012// TI - Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse JO - Diabetologia UR - https://doi.org/10.1007/s00125-012-2564-7 DO - 10.1007/s00125-012-2564-7 ID - Hansen2012 ER - TY - CHAP AU - Hu, G. AU - Feng, Y. AU - O’Hara, S. P. AU - Chen, X. M. ED - Cacciò, S. M. ED - Widmer, G. PY - 2014 DA - 2014// TI - Immunology of cryptosporidiosis BT - Cryptosporidium: Parasite and Disease PB - Springer CY - Switzerland UR - https://doi.org/10.1007/978-3-7091-1562-6_10 DO - 10.1007/978-3-7091-1562-6_10 ID - Hu2014 ER - TY - JOUR AU - Klindworth, A. AU - Pruesse, E. AU - Schweer, T. AU - Peplies, J. AU - Quast, C. AU - Horn, M. PY - 2013 DA - 2013// TI - Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies JO - Nucleic Acids Res UR - https://doi.org/10.1093/nar/gks808 DO - 10.1093/nar/gks808 ID - Klindworth2013 ER - TY - JOUR AU - Limor, J. R. AU - La, A. A. AU - Xiao, L. PY - 2002 DA - 2002// TI - Detection and differentiation of Cryptosporidium parasites that are pathogenic for humans by real-time PCR JO - J Clin Microbiol UR - https://doi.org/10.1128/jcm.40.7.2335-2338.2002 DO - 10.1128/jcm.40.7.2335-2338.2002 ID - Limor2002 ER - TY - JOUR AU - Lozupone, C. AU - Knight, R. PY - 2005 DA - 2005// TI - UniFrac: a new phylogenetic method for comparing microbial communities JO - Appl Environ Microbiol UR - https://doi.org/10.1128/AEM.71.12.8228-8235.2005 DO - 10.1128/AEM.71.12.8228-8235.2005 ID - Lozupone2005 ER - TY - JOUR AU - Maffeis, C. AU - Martina, A. AU - Corradi, M. AU - Quarella, S. AU - Nori, N. AU - Torriani, S. PY - 2016 DA - 2016// TI - Association between intestinal permeability and faecal microbiota composition in Italian children with beta cell autoimmunity at risk for type 1 diabetes JO - Diabetes Metab. Res Rev. UR - https://doi.org/10.1002/dmrr.2790 DO - 10.1002/dmrr.2790 ID - Maffeis2016 ER - TY - JOUR AU - Mejía-León, M. E. AU - Petrosino, J. F. AU - Ajami, N. J. AU - Domínguez-Bello, M. G. AU - Calderón de la Barca, A. M. PY - 2014 DA - 2014// TI - Fecal microbiota imbalance in Mexican children with type 1 diabetes JO - Sci Rep. UR - https://doi.org/10.1038/srep03814 DO - 10.1038/srep03814 ID - Mejía-León2014 ER - TY - JOUR AU - Nagel, R. AU - Traub, R. J. AU - Allcock, R. J. AU - Kwan, M. M. AU - Bielefeldt-Ohmann, H. PY - 2016 DA - 2016// TI - Comparison of faecal microbiota in Blastocystis-positive and Blastocystis-negative irritable bowel syndrome patients JO - Microbiome. UR - https://doi.org/10.1186/s40168-016-0191-0 DO - 10.1186/s40168-016-0191-0 ID - Nagel2016 ER - TY - JOUR AU - Olivares, M. AU - Benítez-Páez, A. AU - Palma, G. AU - Capilla, A. AU - Nova, E. AU - Castillejo, G. PY - 2018 DA - 2018// TI - Increased prevalence of pathogenic bacteria in the gut microbiota of infants at risk of developing celiac disease: the PROFICEL study JO - Gut Microbes. UR - https://doi.org/10.1080/19490976.2018.1451276 DO - 10.1080/19490976.2018.1451276 ID - Olivares2018 ER - TY - JOUR AU - Pal, N. AU - Sharma, R. AU - Sharma, B. AU - Suman, R. PY - 2012 DA - 2012// TI - A case of Cryptosporidium infection in a child of celiac disease JO - J Postgrad Med UR - https://doi.org/10.4103/0022-3859.97227 DO - 10.4103/0022-3859.97227 ID - Pal2012 ER - TY - JOUR AU - Patterson, C. C. AU - Karuranga, S. AU - Salpea, P. AU - Saeedi, P. AU - Dahlquist, G. AU - Soltesz, G. PY - 2019 DA - 2019// TI - Worldwide estimates of incidence, prevalence and mortality of type 1 diabetes in children and adolescents: results from the International Diabetes Federation Diabetes Atlas JO - Diabetes Res Clin Pract VL - 157 UR - https://doi.org/10.1016/j.diabres.2019.107842 DO - 10.1016/j.diabres.2019.107842 ID - Patterson2019 ER - TY - JOUR AU - Pehlivanoğlu, B. AU - Doğanavşargil, B. AU - Sezak, M. AU - Nalbantoğlu, İ. AU - Korkmaz, M. PY - 2016 DA - 2016// TI - Gastrointestinal parasitosis: histopathological insights to rare but intriguing lesions of the gastrointestinal tract JO - Turk Patoloji Derg. UR - https://doi.org/10.5146/tjpath.2015.01350 DO - 10.5146/tjpath.2015.01350 ID - Pehlivanoğlu2016 ER - TY - JOUR AU - Quihui-Cota, L. AU - Lugo-Flores, C. M. AU - Ponce-Martínez, J. A. AU - Morales-Figueroa, G. G. PY - 2015 DA - 2015// TI - Cryptosporidiosis: a neglected infection and its association with nutritional status in schoolchildren in northwestern Mexico JO - J Infect Dev Ctries. UR - https://doi.org/10.3855/jidc.6751 DO - 10.3855/jidc.6751 ID - Quihui-Cota2015 ER - TY - JOUR AU - Ras, R. AU - Huynh, K. AU - Desoky, E. AU - Badawy, A. AU - Widmer, G. PY - 2015 DA - 2015// TI - Perturbation of the intestinal microbiota of mice infected with Cryptosporidium parvum JO - Int J Parasitol UR - https://doi.org/10.1016/j.ijpara.2015.03.005 DO - 10.1016/j.ijpara.2015.03.005 ID - Ras2015 ER - TY - JOUR AU - Sanad, M. M. AU - Al-Malki, J. S. AU - Al-Ghabban, A. G. PY - 2015 DA - 2015// TI - Control of Cryptosporidiosis by probiotic bacteria JO - AEMS UR - https://doi.org/10.15242/IICBE.C0415017 DO - 10.15242/IICBE.C0415017 ID - Sanad2015 ER - TY - JOUR AU - Schulzke, J. D. AU - Schulzke, I. AU - Fromm, M. AU - Riecken, E. O. PY - 1995 DA - 1995// TI - Epithelial barrier and ion transport in coeliac sprue: electrical measurements on intestinal aspiration biopsy specimens JO - Gut VL - 37 UR - https://doi.org/10.1136/gut.37.6.777 DO - 10.1136/gut.37.6.777 ID - Schulzke1995 ER - TY - JOUR AU - Segata, N. AU - Izard, J. AU - Waldron, L. AU - Gevers, D. AU - Miropolsky, L. AU - Garret, W. S. PY - 2011 DA - 2011// TI - Metagenomic biomarker discovery and explanation JO - Genome Biol UR - https://doi.org/10.1186/gb-2011-12-6-r60 DO - 10.1186/gb-2011-12-6-r60 ID - Segata2011 ER - TY - JOUR AU - Tchidjou, H. K. AU - Matteis, A. AU - Iorio, L. AU - Finocchi, A. PY - 2015 DA - 2015// TI - Celiac disease in an adoptive child with recurrent Giardia infection JO - Int J Health Sci. VL - 9 ID - Tchidjou2015 ER - TY - JOUR AU - Tillett, B. J. AU - Hamilton-Williams, E. E. PY - 2020 DA - 2020// TI - Microbiota derived factors as drivers of type 1 diabetes JO - Prog Mol Biol Transl Sci. VL - 171 UR - https://doi.org/10.1016/bs.pmbts.2020.04.008 DO - 10.1016/bs.pmbts.2020.04.008 ID - Tillett2020 ER - TY - JOUR AU - Urrea-Quezada, A. AU - González-Díaz, M. AU - Villegas-Gómez, I. AU - Durazo, M. AU - Hernandez, J. AU - Xiao, L. PY - 2018 DA - 2018// TI - Clinical manifestations of cryptosporidiosis and identification of a new Cryptosporidium subtype in patients from Sonora JO - Mexico. Pediatr Infect Dis J. UR - https://doi.org/10.1097/INF.0000000000001762 DO - 10.1097/INF.0000000000001762 ID - Urrea-Quezada2018 ER - TY - JOUR AU - Vaarala, O. PY - 2012 DA - 2012// TI - Is the origin of type 1 diabetes in the gut? JO - Immunol Cell Biol UR - https://doi.org/10.1038/icb.2011.115 DO - 10.1038/icb.2011.115 ID - Vaarala2012 ER - TY - JOUR AU - Vatanen, T. AU - Franzosa, E. A. AU - Schwager, R. AU - Tripathi, S. AU - Arthur, T. D. AU - Vehik, K. PY - 2018 DA - 2018// TI - The human gut microbiome in early-onset type 1 diabetes from the TEDDY study JO - Nature UR - https://doi.org/10.1038/s41586-018-0620-2 DO - 10.1038/s41586-018-0620-2 ID - Vatanen2018 ER - TY - JOUR AU - Verweij, J. J. AU - Laeijendecker, D. AU - Brienen, E. A. AU - Lieshout, L. AU - Polderman, A. M. PY - 2003 DA - 2003// TI - Detection of Cyclospora cayetanensis in travelers returning from the tropics and subtropics using microscopy and real-time PCR JO - Int J Med Microbiol UR - https://doi.org/10.1078/1438-4221-00252 DO - 10.1078/1438-4221-00252 ID - Verweij2003 ER - TY - JOUR AU - Villa-Jiménez, O. M. AU - Escobedo, A. E. AU - Hano, O. M. AU - Wood, L. W. AU - Pérez, F. P. AU - González, L. G. PY - 2012 DA - 2012// TI - Blastocystis hominis en pacientes celiacos sintomáticos JO - Acta Gastroenterol Latinoam VL - 42 ID - Villa-Jiménez2012 ER - TY - JOUR AU - Yap, Y. A. AU - Mariño, E. PY - 2018 DA - 2018// TI - An Insight Into the Intestinal Web of Mucosal Immunity, Microbiota, and Diet in Inflammation JO - Front Immunol. VL - 9 UR - https://doi.org/10.3389/fimmu.2018.02617 DO - 10.3389/fimmu.2018.02617 ID - Yap2018 ER - TY - JOUR AU - Zebardasta, N. AU - Yeganehb, F. AU - Gharavic, M. J. AU - Abadid, A. AU - Seyyed Tabaeie, S. J. AU - Haghighie, A. K. PY - 2016 DA - 2016// TI - Simultaneous detection and differentiation of Entamoeba histolytica, E. dispar, E. moshkovskii, Giardia lamblia and Cryptosporidium spp. in human fecal samples using multiplex PCR and qPCR-MCA JO - Acta Trop VL - 1 UR - https://doi.org/10.1016/j.actatropica.2016.07.004 DO - 10.1016/j.actatropica.2016.07.004 ID - Zebardasta2016 ER -