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Table 7 Oligonucleotide primers and conditions used to amplify different virulence marker genes in E. faecalis strains by PCR

From: Genetic relatedness of the Enterococcus faecalis isolates in stool and urine samples of patients with community-acquired urinary tract infection

Gene

Primer sequence (5′-3′)

Annealing temperature

Amplicon size (bp)

References

ddlE.faecalis

ATCAAGTACAGTTAGTCTTTATTAG

ACGATTCAAAGCTAACTGAATCAGT

49

941

[19]

Esp

AGATTTCATCTTTGATTCTTGG

AATTGATTCTTAGCATCTGG

48

510

[19]

asa1

TAGGAGTTGTAGGATTAGCTAC

TGTTGTATTCMGCSACTTC

47

677

This study

Ace

GGAATGACCGAGAACGATGGC

GCTTGATGTTGGCCTGCTTCCG

58

616

[12]

cyl

ACTCGGGGATTGATAGGC

GCTGCTAAAGCTGCGCTT

52

688

[2]

gelE

TATGACAATGCTTTTTGGGAT

AGATGCACCCGAAATAATATA

58

213

[2]

efbA

GCACAAGTCCCAAAAGGAGC

AAGTGCGGCTTCAGTAAGGG

58

510

This study

  1. esp, Enterococcal surface protein; asa1, Aggregation substance; ace, Adhesion of collagen of enterococci; cyl, Cytolysin; gelE, Gelatinase; efbA, Pav A-like fibronectin-binding protein