From: Comparative genomics of Helicobacter pullorum from different countries
Strain ID | Contigs | CDS | Source | Country | Assembly level | T6SS | GenBank accessions |
---|---|---|---|---|---|---|---|
NCTC13154 | 1 | 1668 | Chicken caecum | UK | Complete Genome | – | LR134509 |
UBA1817 | 31 | 1666 | Cecal contents | UK | Scaffold | – | DCEZ00000000 |
229254/12 | 138 | 1778 | Fresh chicken meat | Portugal | Scaffold | + | JNOA01000000 |
229313/12 | 60 | 1657 | Fresh chicken meat | Portugal | Scaffold | – | JNOB01000000 |
229334/12 | 229 | 2191 | Fresh chicken meat | Portugal | Scaffold | + | JNOC01000000 |
229336/12 | 91 | 1766 | Fresh chicken meat | Portugal | Scaffold | + | JNUR01000000 |
MIT98-5489 | 44 | 1926 | Human | Canada | Scaffold | + | ABQU00000000 |
NCTC13156 | 3 | 1750 | Human stool | Canada | Scaffold | – | UGJF01000000 |
NCTC12824 | 314 | 1894 | Chicken faeces | Switzerland | Scaffold | + | VZPA01000000 |
35818/8 | 43 | 1603 | Poultry feces | Belgium | Scaffold | – | FZMX01000000 |
35818/9 | 50 | 1793 | Poultry feces | Belgium | Scaffold | + | FZMV01000000 |
NAP10B8 | 105 | 1632 | Chicken caecum(broiler) | India | Scaffold | – | MAOZ00000000 |
NAP11B31 | 139 | 1819 | Chicken caecum(broiler) | India | Scaffold | + | MAJF00000000 |
NAP12B32 | 130 | 1814 | Chicken caecum(broiler) | India | Scaffold | + | MAJG00000000 |
NAP13B35 | 123 | 1811 | Chicken caecum(broiler) | India | Scaffold | + | MANJ00000000 |
NAP14B36 | 101 | 1821 | Chicken caecum(broiler) | India | Scaffold | + | MANK00000000 |
NAP1W4 | 162 | 1886 | Chicken caecum | India | Scaffold | + | LXWI00000000 |
NAP2W5 | 140 | 1742 | Chicken caecum | India | Scaffold | – | MAPE00000000 |
NAP3W17 | 74 | 1662 | Chicken caecum | India | Scaffold | – | MAPD00000000 |
NAP5W19 | 127 | 1668 | Chicken caecum | India | Scaffold | – | MAPC00000000 |
NAP6W24 | 108 | 1614 | Chicken caecum | India | Scaffold | – | MAPB00000000 |
NAP8W25 | 134 | 1751 | Chicken caecum | India | Scaffold | – | MAPA00000000 |
2013BJHL* | 34 | 1855 | Fresh chicken liver | China | Scaffold | + | JXTX01000000 |