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Table 2 Genomes of 24 H. pullorum genomes

From: Comparative genomics of Helicobacter pullorum from different countries

Strain ID

Contigs

CDS

Source

Country

Assembly level

T6SS

GenBank accessions

NCTC13154

1

1668

Chicken caecum

UK

Complete Genome

LR134509

UBA1817

31

1666

Cecal contents

UK

Scaffold

DCEZ00000000

229254/12

138

1778

Fresh chicken meat

Portugal

Scaffold

+

JNOA01000000

229313/12

60

1657

Fresh chicken meat

Portugal

Scaffold

JNOB01000000

229334/12

229

2191

Fresh chicken meat

Portugal

Scaffold

+

JNOC01000000

229336/12

91

1766

Fresh chicken meat

Portugal

Scaffold

+

JNUR01000000

MIT98-5489

44

1926

Human

Canada

Scaffold

+

ABQU00000000

NCTC13156

3

1750

Human stool

Canada

Scaffold

UGJF01000000

NCTC12824

314

1894

Chicken faeces

Switzerland

Scaffold

+

VZPA01000000

35818/8

43

1603

Poultry feces

Belgium

Scaffold

FZMX01000000

35818/9

50

1793

Poultry feces

Belgium

Scaffold

+

FZMV01000000

NAP10B8

105

1632

Chicken caecum(broiler)

India

Scaffold

MAOZ00000000

NAP11B31

139

1819

Chicken caecum(broiler)

India

Scaffold

+

MAJF00000000

NAP12B32

130

1814

Chicken caecum(broiler)

India

Scaffold

+

MAJG00000000

NAP13B35

123

1811

Chicken caecum(broiler)

India

Scaffold

+

MANJ00000000

NAP14B36

101

1821

Chicken caecum(broiler)

India

Scaffold

+

MANK00000000

NAP1W4

162

1886

Chicken caecum

India

Scaffold

+

LXWI00000000

NAP2W5

140

1742

Chicken caecum

India

Scaffold

MAPE00000000

NAP3W17

74

1662

Chicken caecum

India

Scaffold

MAPD00000000

NAP5W19

127

1668

Chicken caecum

India

Scaffold

MAPC00000000

NAP6W24

108

1614

Chicken caecum

India

Scaffold

MAPB00000000

NAP8W25

134

1751

Chicken caecum

India

Scaffold

MAPA00000000

2013BJHL*

34

1855

Fresh chicken liver

China

Scaffold

+

JXTX01000000

  1. “+”: with T6SS gene clusters, “−”:without T6SS gene clusters