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Table 2 Genomes of 24 H. pullorum genomes

From: Comparative genomics of Helicobacter pullorum from different countries

Strain ID Contigs CDS Source Country Assembly level T6SS GenBank accessions
NCTC13154 1 1668 Chicken caecum UK Complete Genome LR134509
UBA1817 31 1666 Cecal contents UK Scaffold DCEZ00000000
229254/12 138 1778 Fresh chicken meat Portugal Scaffold + JNOA01000000
229313/12 60 1657 Fresh chicken meat Portugal Scaffold JNOB01000000
229334/12 229 2191 Fresh chicken meat Portugal Scaffold + JNOC01000000
229336/12 91 1766 Fresh chicken meat Portugal Scaffold + JNUR01000000
MIT98-5489 44 1926 Human Canada Scaffold + ABQU00000000
NCTC13156 3 1750 Human stool Canada Scaffold UGJF01000000
NCTC12824 314 1894 Chicken faeces Switzerland Scaffold + VZPA01000000
35818/8 43 1603 Poultry feces Belgium Scaffold FZMX01000000
35818/9 50 1793 Poultry feces Belgium Scaffold + FZMV01000000
NAP10B8 105 1632 Chicken caecum(broiler) India Scaffold MAOZ00000000
NAP11B31 139 1819 Chicken caecum(broiler) India Scaffold + MAJF00000000
NAP12B32 130 1814 Chicken caecum(broiler) India Scaffold + MAJG00000000
NAP13B35 123 1811 Chicken caecum(broiler) India Scaffold + MANJ00000000
NAP14B36 101 1821 Chicken caecum(broiler) India Scaffold + MANK00000000
NAP1W4 162 1886 Chicken caecum India Scaffold + LXWI00000000
NAP2W5 140 1742 Chicken caecum India Scaffold MAPE00000000
NAP3W17 74 1662 Chicken caecum India Scaffold MAPD00000000
NAP5W19 127 1668 Chicken caecum India Scaffold MAPC00000000
NAP6W24 108 1614 Chicken caecum India Scaffold MAPB00000000
NAP8W25 134 1751 Chicken caecum India Scaffold MAPA00000000
2013BJHL* 34 1855 Fresh chicken liver China Scaffold + JXTX01000000
  1. “+”: with T6SS gene clusters, “−”:without T6SS gene clusters