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Table 1 Representative sequences of EPIYA repeat region

From: Diversity of 3′ variable region of cagA gene in Helicobacter pylori strains isolated from Chinese population

Segment No. Representative sequences
AD 483 KELNEKLFGNSNNNNNGLKNNTEPIYAQVNKKK
BD 478 TGQVASPEEPIYAQVAKKVSAKIDQLNEATS
B′D 56 TGQVASPEEPIYAQVNKKK
B″D 18 AINRKIDRINKIASAGKGVGGFSGAGQSASPEEPIYAQVAKKVSAKIDQLNESAS
D 468 AINRKIDRINKIASAGKGVGGFSGAGRSASPEPIYATIDFDEAN
D′ 12 FPLKRHDKVGDLSKVGLSASPEPIYATIDFDEAN
AC 22 KELNEKFKNFNNNNNGLKNEPIYAKVNKKK
BC 22 TGQVASPEEPIYAQVAKKVNAKIDRLNQIASGLGGVGQAAG
C 28 FPLKRHDKVDDLSKVGLSASPEPIYATIDDLGGP
  1. The subscripts C and D indicate that sequences containing segments A, B, B′ and B″ contain segments C and D, respectively