Table 2 Proportion of intact prophages detected in the 117 Salmonella Typhimurium studied isolated in Brazil
Prophages | Humans (n = 43) (%) | Foods (n = 48) (%) | Swine (n = 26) (%) |
|---|---|---|---|
Aeromo_phiO18P | Not detected | 01/48 (2.1) | 01/26 (3.8) |
Burkho_BcepMu | Not detected | 01/48 (2.1) | Not detected |
Edward_GF_2 | 02/43 (4.6) | 06/48 (12.5) | Not detected |
Entero_186 | 01/43 (2.3) | 01/48 (2.1) | 01/26 (3.8) |
Entero_BP_4795 | 01/43 (2.3) | Not detected | Not detected |
Entero_fiAA91_ss | Not detected | Not detected | 06/26 (23.1) |
Entero_mEp235 | Not detected | Not detected | 01/26 (3.8) |
Entero_N15 | 03/43 (7) | Not detected | Not detected |
Entero_P22 | 03/43 (7) | Not detected | Not detected |
Entero_Tyrion | 01/43 (2.3) | Not detected | Not detected |
Entero_UAB_Phi20 | 05/43 (11.6) | Not detected | Not detected |
Escher_RCS47 | Not detected | Not detected | 02/26 (7.7) |
Gifsy_1 | 10/43 (23) | 34/48 (71) | 19/26 (73) |
Gifsy_2 | 37/43 (86) | 33/48 (68.7) | 09/26 (34.6) |
Haemop_HP1 | 18/43 (41.9) | Not detected | 03/26 (11.5) |
Salmon_118970_sal3 | 25/43 (58.1) | 15/48 (31.2) | 06/26 (23.1) |
Salmon_118970_sal4 | 01/43 (2.3) | Not detected | Not detected |
Salmon_epsilon34 | Not detected | Not detected | 01/26 (3.8) |
Salmon_Fels_1 | Not detected | 01/48 (2.1) | Not detected |
Salmon_Fels_2 | 04/43 (9.3) | 01/48 (2.1) | 04/26 (15.4) |
Salmon_RE_2010 | 07/43 (16.3) | 02/48 (4.2) | 01/26 (3.8) |
Salmon_SEN34 | Not detected | Not detected | 01/26 (3.8) |
Salmon_SP_004 | 01/43 (2.3) | 04/48 (8.3) | 01/26 (3.8) |
Salmon_SPN1S | 17/43 (39.5) | Not detected | Not detected |
Salmon_SPN3UB | Not detected | Not detected | 02/26 (7.7) |
Salmon_SPN9CC | Not detected | 03/48 (6.2) | Not detected |
Salmon_SSU5 | Not detected | 02/48 (4.2) | 01/26 (3.8) |
Salmon_ST64T | 01/43 (2.3) | 02/48 (4.2) | Not detected |
Shigel_Sfll | Not detected | 01/48 (2.1) | 01/26 (3.8) |