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Table 1 General features of genomes sequenced in this study

From: One health pathogen surveillance demonstrated the dissemination of gut pathogens within the two coastal regions associated with intensive farming

Strain

Species

Source

Location

Date

MLST

Beta-lactam

Tetracycline

Phenicol

Sulphonamide

Aminoglycoside

VP142

V. parahaemolyticus

Shrimp

Tangshan

Jul-15

1743

bla CARB−25

–

–

–

–

VP144

V. parahaemolyticus

Shrimp

Tangshan

Jul-15

1743

bla CARB−25

–

–

–

–

VP175

V. parahaemolyticus

Shrimp

Tangshan

Jul-15

424

bla CARB−21

–

–

–

–

VP182

V. parahaemolyticus

Shrimp

Tangshan

Jul-15

415

bla CARB−20

–

–

–

–

VP183

V. parahaemolyticus

Shrimp

Tangshan

Jul-15

1743

bla CARB−25

–

–

–

–

LH80

V. parahaemolyticus

Shrimp

Tangshan

Apr-17

1800

bla CARB−35

–

–

–

–

LH36

V. parahaemolyticus

Shrimp

Tangshan

Apr-17

12

bla CARB−32

–

–

–

–

HB12

V. parahaemolyticus

Shrimp

Tangshan

Apr-17

180

bla CARB−29

tet(59)

–

sul2

–

HB28

V. parahaemolyticus

Water

Tangshan

Apr-17

180

bla CARB−29

tet(59)

–

sul2

–

HB60

V. harveyi

Shrimp

Tangshan

Apr-17

/

–

–

–

sul2

aph(3’’)-Ib/aph(6)-Id

HB18

V. parahaemolyticus

Bird feces

Tangshan

Apr-17

180

bla CARB−29

tet(59)

–

sul2

–

HB100

V. vulnificus

Bird feces

Tangshan

Apr-17

/

–

–

–

–

–

NB113

V. campbellii

Shrimp

Ningbo

Jul-15

/

bla VHH−1

tet(35)

–

–

–

NB111

V. campbellii

Shrimp

Ningbo

Jul-15

/

bla VHH−1

tet(35)

–

–

–

NB118

V. parahaemolyticus

Water

Ningbo

Jul-15

1808

bla CARB−21

–

–

–

–

NB80

V. parahaemolyticus

Water

Ningbo

Apr-17

693

bla CARB−33/41

–

–

–

–

NB102

V. parahaemolyticus

Shrimp

Ningbo

Apr-17

1803

bla CARB−21

–

–

–

–

NB315

V. parahaemolyticus

Shrimp

Ningbo

Apr-17

302

bla CARB−47

–

–

–

–

NB327

V. parahaemolyticus

Shrimp

Ningbo

Apr-17

3

bla CARB−47

–

–

–

–

NB17

V. tubiashii

Water

Ningbo

Apr-17

/

–

–

–

–

–

NB10

V. parahaemolyticus

Bird feces

Ningbo

Apr-17

1

bla CARB−44

–

–

–

–

NB189

V. parahaemolyticus

Bird feces

Ningbo

Apr-17

2414

bla CARB−41

–

–

–

–

NB18

V. tubiashii

Bird feces

Ningbo

Apr-17

/

–

–

–

–

–

NB81

V. campbellii

Bird feces

Ningbo

Apr-17

/

bla VHH−1 /tet(35)

–

–

–

–

NB200

V. campbellii

Bird feces

Ningbo

Apr-17

/

bla VHH−1 /tet(35)

–

–

–

–

NB324

V. diabolicus

Bird feces

Ningbo

Apr-17

/

bla CARB−42

–

–

–

–

HZB82

S. typhimurium

Shrimp

Ningbo

Apr-17

19

–

–

–

–

–

HZB83

S. typhimurium

Shrimp

Ningbo

Apr-17

19

–

–

–

–

–

HZB84

S. typhimurium

Shrimp

Ningbo

Apr-17

19

–

–

–

–

–

HZB86

S. typhimurium

Stool

Ningbo

Apr-17

19

–

–

–

–

–

HB16

Klebsiella pneumoniae

Water

Tangshan

Apr-17

515

bla SHV−145

–

fosA/oqxAB

–

–

HB180

Klebsiella quasipneumoniae

Water

Tangshan

Apr-17

/

bla OKP−B−2

–

fosA/oqxAB

–

–

NXS

Acinetobacter pittii

Sediment

Tangshan

Apr-17

19

bla OXA−335

tet(59)

mph(E)/msr(E)/floR

sul1/sul2

aac(6’)-Ib3/aph(3’’)-Ib/ aph(6)-Id