Table 1 The genes related to bile adaption in S. maltophilia ZT1
From: The complete genome sequence of a bile-isolated Stenotrophomonas maltophilia ZT1
Gene ID | Swissprot_tophit_descrip | Swissprot top similarity % | KEGG gene name |
|---|---|---|---|
ZT1002978 | Multidrug export protein EmrB OS = Escherichia coli (strain K12) | 49.4 | emrB |
ZT1002979 | Multidrug export protein EmrA OS = Haemophilus influenzae (strain ATCC 51907) | 45.2 | emrA |
ZT1000837 | HTH-type transcriptional regulator AcrR OS = Shigella flexneri | 31.4 | acrR, smeT |
ZT1000838 | Multidrug efflux pump subunit AcrA OS = Escherichia coli (strain K12) | 43.9 | acrA, mexA |
ZT1000839 | Multidrug efflux pump subunit AcrB OS = Escherichia coli (strain K12) | 64 | acrB, mexB |
ZT1000961 | Outer membrane protein TolC OS = Vibrio cholerae serotype O1 (strain ATCC 39,315) | 31.7 | tolC |
ZT1001690 | Multidrug efflux pump subunit AcrB OS = Escherichia coli (strain K12) | 50 | acrB, mexB |
ZT1001691 | Multidrug efflux pump subunit AcrA OS = Escherichia coli (strain K12) | 41.2 | acrA, mexA |
ZT1003728 | O-antigen biosynthesis protein RfbC OS = Myxococcus xanthus | 42.1 | rfbC |
ZT1003730 | O-antigen export system ATP-binding protein RfbB OS = Myxococcus xanthus | 39 | ABC-.LPSE.A |
ZT1003731 | O-antigen export system permease protein RfbA OS = Klebsiella pneumoniae | 22 | _ |
ZT1000559 | Virulence transcriptional regulatory protein PhoP OS = Salmonella typhi | 39.4 | _ |
ZT1000233 | Virulence transcriptional regulatory protein PhoP OS = Salmonella typhi | 43.7 | phoP |
ZT1000632 | Multidrug resistance protein MdtC OS = Enterobacter sp. (strain 638) | 44.5 | _ |
ZT1000633 | Multidrug resistance protein MdtB OS = Xenorhabdus bovienii (strain SS-2004) | 51.1 | mdtB |
ZT1000634 | Multidrug resistance protein MdtA OS = Dickeya zeae (strain Ech586) | 40.3 | mdtA |
ZT1003430 | Outer membrane porin F OS = Pseudomonas aeruginosa (strain ATCC 15,692) | 32 | TC.OOP |
ZT1003393 | DNA-binding protein HU OS = Xylella fastidiosa (strain Temecula1 / ATCC 700,964) | 76.4 | hupB |
ZT1002604 | UTP–glucose-1-phosphate uridylyltransferase OS = Pseudomonas aeruginosa (strain PAO1) | 46.5 | galU, galF |
ZT1002538 | UDP-glucose 4-epimerase OS = Bacillus halodurans (strain ATCC BAA-125) | 51.4 | galE, GALE |
ZT1003099 | DNA mismatch repair protein MutS OS = Xanthomonas campestris (strain ATCC 33,913) | 89.6 | mutS |
ZT1003056 | Zinc uptake regulation protein OS = Shigella flexneri | 37.6 | zur |