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Table 2 Top 6 overlapped candidate genes for different microbial traits

From: Transcriptome-wide association study identified candidate genes associated with gut microbiota

Gene

Tissue

Microbial trait

Z

P

NDUFV3

Sigmoid colon

P_Lentisphaerae_HB

3.61

1.35 × 10–3

Sigmoid colon

Div_NumberGenera_RNT

3.52

1.58 × 10–3

Sigmoid colon

G_O_Bacteroidales_HB

3.45

1.96 × 10–3

Sigmoid colon

G_Prevotella_HB

3.25

1.99 × 10–3

Sigmoid colon

G_O_Clostridiales_RNT

3.33

2.01 × 10–3

Sigmoid colon

Div_Chao1_RNT

3.18

2.48 × 10–3

Transverse colon

P_Lentisphaerae_HB

3.41

2.51 × 10–3

Transverse colon

G_O_Clostridiales_RNT

3.20

3.19 × 10–3

Sigmoid colon

G_F_Ruminococcaceae_RNT

3.35

3.65 × 10–3

Sigmoid colon

G_Victivallis_HB

3.08

4.37 × 10–3

Transverse colon

G_O_Bacteroidales_HB

2.98

4.64 × 10–3

Sigmoid colon

G_Bacteroides_RNT

− 3.22

5.11 × 10–3

Transverse colon

G_Bacteroides_RNT

− 3.30

6.08 × 10–3

Sigmoid colon

G_Sporobacter_RNT

3.26

1.01 × 10–2

Sigmoid colon

G_P_Bacteroidetes_HB

2.85

1.14 × 10–2

SH3PXD2B

Sigmoid colon

Div_Shannon_RNT

− 4.04

1.26 × 10–3

Sigmoid colon

Div_Chao1_RNT

− 3.54

1.44 × 10–3

Sigmoid colon

G_F_Ruminococcaceae_RNT

− 3.49

1.60 × 10–3

Sigmoid colon

F_Desulfovibrionaceae_RNT

− 3.54

1.87 × 10–3

Sigmoid colon

F_Porphyromonadaceae_RNT

− 4.02

2.04 × 10–3

Sigmoid colon

Div_NumberGenera_RNT

− 3.46

2.58 × 10–3

Sigmoid colon

G_Desulfovibrio_HB

− 3.42

2.64 × 10–3

Sigmoid colon

C_Deltaproteobacteria_HB

− 3.16

3.33 × 10–3

Sigmoid colon

G_O_Clostridiales_RNT

− 3.55

4.15 × 10–3

Sigmoid colon

G_Barnesiella_HB

− 3.50

4.77 × 10–3

Sigmoid colon

P_Lentisphaerae_HB

− 3.47

5.03 × 10–3

Sigmoid colon

G_Oscillibacter_RNT

− 3.72

6.04 × 10–3

RP3-388E23.2

Transverse colon

G_Butyrivibrio_HB

3.93

3.46 × 10–5

Transverse colon

Div_Shannon_RNT

3.43

4.13 × 10–4

Transverse colon

G_O_Clostridiales_RNT

2.70

1.33 × 10–3

Transverse colon

G_Clostridium_sensu_RNT

2.71

2.73 × 10–3

Transverse colon

G_F_Ruminococcaceae_RNT

2.72

2.94 × 10–3

Sigmoid colon

G_F_Ruminococcaceae_RNT

2.61

5.84 × 10–3

Sigmoid colon

G_F_Porphyromonadaceae_RNT

2.56

7.77 × 10–3

Sigmoid colon

G_Dorea_RNT

2.06

1.04 × 10–2

Transverse colon

G_P_Proteobacteria_HB

2.43

1.21 × 10–2

Sigmoid colon

G_Intestinibacter_HB

2.08

1.98 × 10–2

Transverse colon

G_Oscillibacter_RNT

2.22

2.44 × 10–2

CYP3A7

Transverse colon

G_Bacteroides_RNT

− 2.46

6.27 × 10–6

Transverse colon

G_P_Proteobacteria_HB

2.28

7.96 × 10–6

Transverse colon

G_Methanobrevibacter_HB

2.31

3.04 × 10–5

Transverse colon

Div_Chao1_RNT

2.76

3.29 × 10–5

Transverse colon

Div_NumberGenera_RNT

2.48

1.59 × 10–4

Transverse colon

O_Burkholderiales_RNT

2.60

2.94 × 10–4

Transverse colon

G_Victivallis_RNT

2.26

4.90 × 10–4

Transverse colon

Div_Shannon_RNT

2.45

6.20 × 10–4

Transverse colon

G_Gemmiger_HB

2.68

6.51 × 10–4

Transverse colon

G_Methanobrevibacter_HB

2.19

9.41 × 10–4

WDR5B

Sigmoid colon

F_Veillonellaceae_HB

− 3.20

4.99 × 10–4

Transverse colon

G_F_Porphyromonadaceae_RNT

3.31

2.00 × 10–3

Sigmoid colon

G_F_Porphyromonadaceae_RNT

3.35

2.05 × 10–3

Sigmoid colon

O_Rhodospirillales_HB

3.20

3.45 × 10–3

Sigmoid colon

G_O_Clostridiales_RNT

2.37

3.57 × 10–3

Sigmoid colon

C_Alphaproteobacteria_HB

3.37

3.91 × 10–3

Sigmoid colon

G_P_Proteobacteria_RNT

− 2.51

4.66 × 10–3

Transverse colon

F_Acidaminococcaceae_RNT

− 2.49

4.75 × 10–3

Sigmoid colon

F_Rhodospirillaceae_HB

2.97

4.80 × 10–3

Sigmoid colon

G_F_Rhodospirillaceae_HB

2.76

6.18 × 10–3

DFNB59

Sigmoid colon

G_F_Porphyromonadaceae_HB

− 3.67

7.08 × 10–5

Sigmoid colon

G_Akkermansia_HB

− 2.64

6.56 × 10–4

Sigmoid colon

F_Desulfovibrionaceae_RNT

− 3.30

8.33 × 10–4

Sigmoid colon

G_Oscillibacter_RNT

− 3.87

8.78 × 10–4

Sigmoid colon

G_Victivallis_HB

− 2.99

1.42 × 10–3

Sigmoid colon

G_O_Clostridiales_RNT

− 3.13

1.97 × 10–3

Sigmoid colon

G_F_Coriobacteriaceae_HB

− 2.99

2.54 × 10–3

Sigmoid colon

G_Alistipes_RNT

− 2.85

2.91 × 10–3

Sigmoid colon

G_Eisenbergiella_HB

− 2.12

3.39 × 10–3