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Table 2 Presence of T6SS components in C. coli and C. jejuni chicken isolates in comparison with the amino acid sequence matches of C. jejuni strain 108

From: Virulence characteristics of hcp + Campylobacter jejuni and Campylobacter coli isolates from retail chicken

 

TssA

TssB

TssC.

TssD

TssE

TssF

TssG

TssH

TssI

TssJ

TssK

TssL

TssM

  

Amino acids

415

161

484

171

130

573

302

299

838

148

465

257

1175

  

REFERENCE

TssA

TssB

TssC

TssD

TssE

TssF

TssG

TssH

TssI

TssJ

TssK

TssL

TssM

PCR results

Spp.

RC008

             

+

C.colli

RC013

             

+

C.colli

RC023

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

568 (99.1%)

302 (100%)

294 (98.3%)

758 (90.5%)

147 (99.3%)

464 (99.8%)

257 (100%)

1171 (99.7%)

+

C.colli

RC026

             

+

C.colli

RC037

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC043

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC096

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

791 (94.4%)

147 (99.3%)

436 (93.8%)

257 (100%)

1151 (97.8%)

+

C.colli

RC105

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RG106

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC116

311 (74.9%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC126

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC127

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC148

389 (93.7%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

465 (100%)

254(98.8%)

1170 (99.6%)

+

C.colli

RC182

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

432 (92.9%)

257 (100%)

1170 (99.6%)

+

C.colli

RC264

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

465 (100%)

257 (100%)

1170 (99.6%)

+

C.colli

RC269

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC281

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC282

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC284

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC285

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC289

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1168(99.4%)

+

C.colli

RC291

             

+

C.colli

RC382

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC383

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC386

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC387

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC430

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

459 (98.7%)

226 (87.9%)

1170 (99.6%)

+

C.colli

RC415

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC428

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.colli

RC459

    

126 (97.0%)

567 (99.0%)

146 (48.3%)

295(98.7%)

599 (71.5%)

   

1170 (99.6%)

+

C.colli

12502

413 (99.5%)

160 (99.4%)

481 (99.4%)

171 (100%)

127 (97.7%)

569 (99.3%)

301 (99.7%)

294 (98.3%)

825 (98.4%)

147 (99.3%)

464 (99.8%)

254 (98.8%)

1171 (99.7%)

+

C.jejuni

RC018

  

344 (71.1%)

 

127 (97.7%)

569 (99.3%)

302 (100%)

 

821 (98.0%)

   

332 (28.3%)

+

C.colli

RC039

412 (99.3%)

160 (99.4%)

481 (99.4%)

169 (98.8%)

126 (97.0%)

541 (94.4%)

302 (100%)

294 (98.3%)

821 (98.0%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC104

340 (81.9%)

155 (96.3%)

477 (99.4%)

156 (91.2%)

115 (88.5%)

567 (99.0%)

272 (90.1%)

296 (99.0%)

782 (93.3%)

146(98.6%)

465 (100%)

255 (99.2%)

1158 (98.6%)

+

C.jejuni

RC168

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

526 (91.8%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC169

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC179

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC186

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC185

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC220

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

416 (89.5%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC270

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC280

367 (88.4%)

156 (96.9%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

226 (87.9%)

1170 (99.6%)

+

C.jejuni

RC317

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC410

             

+

C.jejuni

RC427

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

449 (96.6%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC508

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

294 (98.3%)

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

1170 (99.6%)

+

C.jejuni

RC517

412 (99.3%)

160 (99.4%)

481 (99.4%)

171 (100%)

126 (97.0%)

567 (99.0%)

302 (100%)

 

820 (97.9%)

147 (99.3%)

464 (99.8%)

257 (100%)

 

+

C.jejuni

RC526

  

422 (87.2%)

 

126 (97.0%)

  

147 (49.2%)

493 (58.8%)

    

+

C.jejuni

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