Skip to main content

Table 2 Comparison of the taxonomic assignments obtained (using SPHINX algorithm) for sequences specific to malnourished and healthy samples (at the taxonomic level of order)

From: Metagenome of the gut of a malnourished child

  % of sequences assigned   
Order Name Malnourished sample (X) Healthy Sample (Y) Relative Ratio (X/Y) Inference
Campylobacterales 78.87 0.06 1235.57 High in malnourished
Clostridiales 11.4 0.1 119.1 High in malnourished
Lactobacillales 0.79 3.19 0.25 High in healthy
Enterobacteriales 0.11 5.07 0.02 High in healthy
Pseudomonadales 0.04 5.27 0.01 High in healthy
Chloroflexales 0.02 4.44 0 High in healthy
Desulfurovibrionales 0 4.44 0 High in healthy
Bifidobacteriales 0 6.98 N.A High in healthy
Xanthomonadales 0 3.21 N.A High in healthy
Plantomycetales 0 2.13 N.A High in healthy
Halobacteriales 0 12.24 N.A High in healthy
Actinomycetales 0 19.72 N.A High in healthy
Burkholderiales 0 19.39 N.A High in healthy
Rhizobiales 0 2.39 N.A High in healthy