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Table 1 List of experimentally included Campylobacters and other bacterial species

From: Detection, identification and quantification of Campylobacter jejuni, coli and lari in food matrices all at once using multiplex qPCR

Species

Strain

Source

Real-time PCR specificity

C. jejuni subsp. jejuni

CCM 6212

Human blood

+

C. jejuni subsp. jejuni

NCTC 11168

Human faeces

+

C. jejuni subsp. jejuni

81-176

Human faeces

+

C. jejuni

1 K

Chicken meat

+

C. jejuni

667/C4

Human clinical isolate

+

C. jejuni

681/C5

Human clinical isolate

+

C. jejuni

2517

Human clinical isolate

+

C. jejuni

3316

Human clinical isolate

+

C. jejuni

13

Wastewater treatment plant

+

C. jejuni

53G

Turkey breasts

+

C. coli

CCM 6211

Pig

+

C. coli

549/6

Wastewater treatment plant

+

C. coli

490/3

Wastewater treatment plant

+

C. coli

C253

Human clinical isolate

+

C. coli

C254

Human clinical isolate

+

C. coli

C226

Human clinical isolate

+

C. coli

2463

Human clinical isolate

+

C. coli

2521

Human clinical isolate

+

C. coli

2530

Human clinical isolate

+

C. coli

52

Chicken breasts

+

C. lari

CCM 4897

Herring gull, cloacal swab

+

C. fetus subsp. fetus

CCM 6213

Human blood

-

C. upsaliensis

ATCC 43954

Animal faeces

-

Arcobacter butzleri

2013/43

Chicken thigh

-

Arcobacter cryaerophilus

2012/1

Wastewater treatment plant

-

Arcobacter skirrowii

2013/34

Cow teat

-

Bacillus cereus

DBM 3035

Not found

-

Bacillus megaterium

CCM 2007

Not found

-

Bacillus subtilis subsp. spizizenii

CCM 1999

Not found

-

Cronobacter sakazakii

ATCC 29544

Child’s throat

-

Enterobacter cloacae

CCM 1903

Plasma

-

Enterococcus faecalis

CCM 4224

Urine

-

Escherichia coli

CCM 4517

Human faeces

-

Escherichia coli

485

Raw milk

-

Listeria innocua

CCM 4030

Cow brain

-

Listeria ivanovii subsp. ivanovii

CCM 5884

Sheep

-

Listeria monocytogenes

CCM 5576

Guinea pig mesenteric lymph node

-

Listeria monocytogenes EGD-e

ATCC BAA-679

Animal tissue

-

Pseudomonas aeruginosa

CCM 1968

Not found

-

Pseudomonas aeruginosa

49

Turkey meat

-

Rhodococcus equi

CCM 3429

Lung abscess of foal

-

Salmonella enterica subsp. enterica

CCM 7205

Animal tissue

-

Staphylococcus aureus subsp. aureus

CCM 3953

Clinical isolate

-

Yersinia enterocolytica

CNCTC 7252 Y41/73

Human faeces

-

Yersinia ruckeri

CCM 6093

Rainbow trout

-

  1. ATCC – American Type Culture Collection.
  2. CCM – Czech Collection of Microorganisms.
  3. CNCTC – The Czech National Collection of Type Cultures.
  4. DBM – Department of Biochemistry and Microbiology, ICT Prague.
  5. NCTC - National Collection of Type Cultures.