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Table 1 List of experimentally included Campylobacters and other bacterial species

From: Detection, identification and quantification of Campylobacter jejuni, coli and lari in food matrices all at once using multiplex qPCR

Species Strain Source Real-time PCR specificity
C. jejuni subsp. jejuni CCM 6212 Human blood +
C. jejuni subsp. jejuni NCTC 11168 Human faeces +
C. jejuni subsp. jejuni 81-176 Human faeces +
C. jejuni 1 K Chicken meat +
C. jejuni 667/C4 Human clinical isolate +
C. jejuni 681/C5 Human clinical isolate +
C. jejuni 2517 Human clinical isolate +
C. jejuni 3316 Human clinical isolate +
C. jejuni 13 Wastewater treatment plant +
C. jejuni 53G Turkey breasts +
C. coli CCM 6211 Pig +
C. coli 549/6 Wastewater treatment plant +
C. coli 490/3 Wastewater treatment plant +
C. coli C253 Human clinical isolate +
C. coli C254 Human clinical isolate +
C. coli C226 Human clinical isolate +
C. coli 2463 Human clinical isolate +
C. coli 2521 Human clinical isolate +
C. coli 2530 Human clinical isolate +
C. coli 52 Chicken breasts +
C. lari CCM 4897 Herring gull, cloacal swab +
C. fetus subsp. fetus CCM 6213 Human blood -
C. upsaliensis ATCC 43954 Animal faeces -
Arcobacter butzleri 2013/43 Chicken thigh -
Arcobacter cryaerophilus 2012/1 Wastewater treatment plant -
Arcobacter skirrowii 2013/34 Cow teat -
Bacillus cereus DBM 3035 Not found -
Bacillus megaterium CCM 2007 Not found -
Bacillus subtilis subsp. spizizenii CCM 1999 Not found -
Cronobacter sakazakii ATCC 29544 Child’s throat -
Enterobacter cloacae CCM 1903 Plasma -
Enterococcus faecalis CCM 4224 Urine -
Escherichia coli CCM 4517 Human faeces -
Escherichia coli 485 Raw milk -
Listeria innocua CCM 4030 Cow brain -
Listeria ivanovii subsp. ivanovii CCM 5884 Sheep -
Listeria monocytogenes CCM 5576 Guinea pig mesenteric lymph node -
Listeria monocytogenes EGD-e ATCC BAA-679 Animal tissue -
Pseudomonas aeruginosa CCM 1968 Not found -
Pseudomonas aeruginosa 49 Turkey meat -
Rhodococcus equi CCM 3429 Lung abscess of foal -
Salmonella enterica subsp. enterica CCM 7205 Animal tissue -
Staphylococcus aureus subsp. aureus CCM 3953 Clinical isolate -
Yersinia enterocolytica CNCTC 7252 Y41/73 Human faeces -
Yersinia ruckeri CCM 6093 Rainbow trout -
  1. ATCC – American Type Culture Collection.
  2. CCM – Czech Collection of Microorganisms.
  3. CNCTC – The Czech National Collection of Type Cultures.
  4. DBM – Department of Biochemistry and Microbiology, ICT Prague.
  5. NCTC - National Collection of Type Cultures.
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Gut Pathogens

ISSN: 1757-4749