Detection, identification and quantification of Campylobacter jejuni , coli and lari in food matrices all at once using multiplex qPCR

Lucie Vondrakova; Jarmila Pazlarova; Katerina Demnerova

doi:10.1186/1757-4749-6-12

Table 1 List of experimentally included Campylobacters and other bacterial species

From: Detection, identification and quantification of Campylobacter jejuni, coli and lari in food matrices all at once using multiplex qPCR

Species	Strain	Source	Real-time PCR specificity
C. jejuni subsp. jejuni	CCM 6212	Human blood	+
C. jejuni subsp. jejuni	NCTC 11168	Human faeces	+
C. jejuni subsp. jejuni	81-176	Human faeces	+
C. jejuni	1 K	Chicken meat	+
C. jejuni	667/C4	Human clinical isolate	+
C. jejuni	681/C5	Human clinical isolate	+
C. jejuni	2517	Human clinical isolate	+
C. jejuni	3316	Human clinical isolate	+
C. jejuni	13	Wastewater treatment plant	+
C. jejuni	53G	Turkey breasts	+
C. coli	CCM 6211	Pig	+
C. coli	549/6	Wastewater treatment plant	+
C. coli	490/3	Wastewater treatment plant	+
C. coli	C253	Human clinical isolate	+
C. coli	C254	Human clinical isolate	+
C. coli	C226	Human clinical isolate	+
C. coli	2463	Human clinical isolate	+
C. coli	2521	Human clinical isolate	+
C. coli	2530	Human clinical isolate	+
C. coli	52	Chicken breasts	+
C. lari	CCM 4897	Herring gull, cloacal swab	+
C. fetus subsp. fetus	CCM 6213	Human blood	-
C. upsaliensis	ATCC 43954	Animal faeces	-
Arcobacter butzleri	2013/43	Chicken thigh	-
Arcobacter cryaerophilus	2012/1	Wastewater treatment plant	-
Arcobacter skirrowii	2013/34	Cow teat	-
Bacillus cereus	DBM 3035	Not found	-
Bacillus megaterium	CCM 2007	Not found	-
Bacillus subtilis subsp. spizizenii	CCM 1999	Not found	-
Cronobacter sakazakii	ATCC 29544	Child’s throat	-
Enterobacter cloacae	CCM 1903	Plasma	-
Enterococcus faecalis	CCM 4224	Urine	-
Escherichia coli	CCM 4517	Human faeces	-
Escherichia coli	485	Raw milk	-
Listeria innocua	CCM 4030	Cow brain	-
Listeria ivanovii subsp. ivanovii	CCM 5884	Sheep	-
Listeria monocytogenes	CCM 5576	Guinea pig mesenteric lymph node	-
Listeria monocytogenes EGD-e	ATCC BAA-679	Animal tissue	-
Pseudomonas aeruginosa	CCM 1968	Not found	-
Pseudomonas aeruginosa	49	Turkey meat	-
Rhodococcus equi	CCM 3429	Lung abscess of foal	-
Salmonella enterica subsp. enterica	CCM 7205	Animal tissue	-
Staphylococcus aureus subsp. aureus	CCM 3953	Clinical isolate	-
Yersinia enterocolytica	CNCTC 7252 Y41/73	Human faeces	-
Yersinia ruckeri	CCM 6093	Rainbow trout	-

ATCC – American Type Culture Collection.
CCM – Czech Collection of Microorganisms.
CNCTC – The Czech National Collection of Type Cultures.
DBM – Department of Biochemistry and Microbiology, ICT Prague.
NCTC - National Collection of Type Cultures.

Back to article page