Genome sequencing and genomic characterization of a tigecycline-resistant Klebsiella pneumoniae strain isolated from the bile samples of a cholangiocarcinoma patient

Table 1 Summary of CDSs annotated to RND efflux pump genes

Aligned protein	Query sequence length	Coverage (%)	Hit length	Identity (%)	Description
AcrA	240	64.17	146	60.08	Probable RND efflux membrane fusion protein
OqxB	217	20.66	141	64.98	Probable RND efflux system inner membrane transporter CmeB
OqxB	181	18.53	110	60.77	Probable RND multi-drug efflux transporter
OqxB	160	15.27	105	65.62	Probable RND efflux system inner membrane transporter CmeB
AcrA	397	100	397	100	Membrane fusion protein of RND family multi-drug efflux pump
OqxR	483	100	480	99.38	Transcriptional regulator
OqxB	1050	100	1050	100	RND multi-drug efflux transporter
OqxA	391	100	391	100	RND multi-drug efflux transporter
RarA	369	100	366	99.19	Bacterial regulatory helix-turn-helix proteins, AraC family
OqxB	161	15.33	101	62.73	Probable RND multi-drug efflux transporter
AcrA	328	83.89	248	75.61	Probable RND efflux system membrane fusion protein CmeA
OqxB	217	20.67	143	65.9	Probable RND efflux system inner membrane transporter CmeB
TolC	1520	100	1474	96.97	Outer membrane efflux protein
OqxB	326	31.05	200	61.35	Probable RND efflux system inner membrane transporter CmeB

ISSN: 1757-4749