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Table 1 OTUs (0.05% coverage) and diversity indices from samples at different timepoint and part of intestine

From: Deciphering chicken gut microbial dynamics based on high-throughput 16S rRNA metagenomics analyses

Samples

Number of observed OTUs

ACE

Shannon

Inverse Simpson

7I

284

310.076

1.475

2.966

14I

430

455.014

3.312

12.869

21I

434

474.384

3.353

14.160

42I

603

630.024

3.347

11.936

7C

362

413.762

2.587

6.367

14C

487

552.406

3.663

17.758

21C

598

662.885

3.732

18.052

42C

660

706.335

4.365

34.077

  1. For each timepoint (Day 7, 14, 21 and 42) and part of intestine (I = ilea, C = caeca). Total number of sequences normalized for each sample, n = 352,780).