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Table 2 Presence of T6SS components in C. coli and C. jejuni chicken isolates in comparison with the amino acid sequence matches of C. jejuni strain 108

From: Virulence characteristics of hcp + Campylobacter jejuni and Campylobacter coli isolates from retail chicken

  TssA TssB TssC. TssD TssE TssF TssG TssH TssI TssJ TssK TssL TssM   
Amino acids 415 161 484 171 130 573 302 299 838 148 465 257 1175   
REFERENCE TssA TssB TssC TssD TssE TssF TssG TssH TssI TssJ TssK TssL TssM PCR results Spp.
RC008               + C.colli
RC013               + C.colli
RC023 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 568 (99.1%) 302 (100%) 294 (98.3%) 758 (90.5%) 147 (99.3%) 464 (99.8%) 257 (100%) 1171 (99.7%) + C.colli
RC026               + C.colli
RC037 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC043 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC096 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 791 (94.4%) 147 (99.3%) 436 (93.8%) 257 (100%) 1151 (97.8%) + C.colli
RC105 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RG106 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC116 311 (74.9%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC126 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC127 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC148 389 (93.7%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 465 (100%) 254(98.8%) 1170 (99.6%) + C.colli
RC182 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 432 (92.9%) 257 (100%) 1170 (99.6%) + C.colli
RC264 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 465 (100%) 257 (100%) 1170 (99.6%) + C.colli
RC269 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC281 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC282 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC284 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC285 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC289 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1168(99.4%) + C.colli
RC291               + C.colli
RC382 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC383 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC386 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC387 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC430 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 459 (98.7%) 226 (87.9%) 1170 (99.6%) + C.colli
RC415 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC428 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.colli
RC459      126 (97.0%) 567 (99.0%) 146 (48.3%) 295(98.7%) 599 (71.5%)     1170 (99.6%) + C.colli
12502 413 (99.5%) 160 (99.4%) 481 (99.4%) 171 (100%) 127 (97.7%) 569 (99.3%) 301 (99.7%) 294 (98.3%) 825 (98.4%) 147 (99.3%) 464 (99.8%) 254 (98.8%) 1171 (99.7%) + C.jejuni
RC018    344 (71.1%)   127 (97.7%) 569 (99.3%) 302 (100%)   821 (98.0%)     332 (28.3%) + C.colli
RC039 412 (99.3%) 160 (99.4%) 481 (99.4%) 169 (98.8%) 126 (97.0%) 541 (94.4%) 302 (100%) 294 (98.3%) 821 (98.0%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC104 340 (81.9%) 155 (96.3%) 477 (99.4%) 156 (91.2%) 115 (88.5%) 567 (99.0%) 272 (90.1%) 296 (99.0%) 782 (93.3%) 146(98.6%) 465 (100%) 255 (99.2%) 1158 (98.6%) + C.jejuni
RC168 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 526 (91.8%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC169 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC179 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC186 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC185 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC220 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 416 (89.5%) 257 (100%) 1170 (99.6%) + C.jejuni
RC270 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC280 367 (88.4%) 156 (96.9%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 226 (87.9%) 1170 (99.6%) + C.jejuni
RC317 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC410               + C.jejuni
RC427 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 449 (96.6%) 257 (100%) 1170 (99.6%) + C.jejuni
RC508 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%) 294 (98.3%) 820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%) 1170 (99.6%) + C.jejuni
RC517 412 (99.3%) 160 (99.4%) 481 (99.4%) 171 (100%) 126 (97.0%) 567 (99.0%) 302 (100%)   820 (97.9%) 147 (99.3%) 464 (99.8%) 257 (100%)   + C.jejuni
RC526    422 (87.2%)   126 (97.0%)    147 (49.2%) 493 (58.8%)      + C.jejuni