Skip to main content

Table 1 Characteristics of the eight VNTRs observed in the 103 S. Typhi strains

From: Genotyping of Salmonella Typhi using 8-loci multi locus VNTR analysis

VNTR name Consensus No. of alleles Range of no. of repeats PCR product size range (bp) D values
Sal02 TACCAG 21 6–27 125–251 0.925
Sal06 CTCAAT 4 4–7 168–186 0.416
Sal11(TR1) AGAAGAA 17 5–20, 30 190–365 0.902
Sal16 ACCATG 13 10– 19, 22, 24, 26 200–296 0.909
Sal20 CAG 9 9, 13–20 172–205 0.795
Sal22 CGTCACG 3 3– 5 163–187 0.182
TR4699 TGTTGG 21 7, 9–22, 24–26, 28, 30, 31 169–313 0.925
TR2 CCAGTTCC 34 4–28, 30–32, 35, 36, 38, 40, 42, 46 297–633 0.965