Table 3 Operon prediction
From: Outer membrane phospholipase A’s roles in Helicobacter pylori acid adaptation
Species | Representative strain | Host | Classification | Upstream | Downstream |
|---|---|---|---|---|---|
H. acinonychis | Sheeba | Cheetah | Gastric | AmCI and AmCII | dnaN, gyrB, 2 hypothetical genes |
H. cetorum | MIT 99-5656 | Dolphin | Gastric | AmCI* and AmCII | dnaN, gyrB |
H. pylori | ATCC 43504 | Human | Gastric | AmCI and AmCII | dnaN, gyrB, 2 hypothetical genes |
H. bizzozeronii | CIII-1 | Human | Gastric | AmCI and AmCII | No |
H. himalayensis | YS1 | Marmota himalayana | Gastric | No | No |
H. suis | HS5 | Swine | Gastric | AmCI and AmCII | No |
H. felis | ATCC 49179 | Cat | Gastric | AmCI and AmCII | No |
H. mustelae | 12198 | Ferret | Gastric | No | No |
H. heilmannii | ASB1.4 | Cat | Gastric | AmCI* and AmCII | No |
H. bilis | ATCC 43879 | Human | Enterohepatic | No | No |
H. canadensis | MIT 98-5491 | Human | Enterohepatic | No | No |
H. canis | NCTC 12740 | Human | Enterohepatic | No | pseH |
H. cinaedi | CCUG 18818 = ATCC BAA-847 | Human | Enterohepatic | No | metE |
H. fennelliae | MRY 12-0050 | Human | Enterohepatic | Hypothetical | SAM-dependent MTase genes |
H. hepaticus | ATCC 51449 | Mouse | Enterohepatic | No | metE, and gene encoding NADPH |
H. muridarum | ST-1 | Rat | Enterohepatic | No | ABC transporter gene |
H. pullorum | MIT 98-5489 | Human | Enterohepatic | No | No |
H. rodentium | ATCC 700285 | Mouse | Enterohepatic | No | No |
H. trogontum | ATCC 700114 | Rat | Enterohepatic | No | No |
H. typhlonicus | MIT 97-6810 | Mouse | Enterohepatic | No | No |
H. winghamensis | ATCC BAA-430 | Human | Enterohepatic | No | No |