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Table 2 COG functional categories of Lactobacillus rhamnosus Pen genome

From: Complete genome sequence of Lactobacillus rhamnosus Pen, a probiotic component of a medicine used in prevention of antibiotic-associated diarrhoea in children

#COG class Description Count %
Information storage and processing
 [J] Translation, ribosomal structure and biogenesis 153 5.4
 [A] RNA processing and modification 0 0.0
 [K] Transcription 208 7.3
 [L] Replication, recombination and repair 135 4.8
 [B] Chromatin structure and dynamics 0 0.0
Cellular processes and signaling
 [D] Cell cycle control, cell division, chromosome partitioning 34 1.2
 [Y] Nuclear structure 0 0.0
 [V] Defense mechanisms 101 3.6
 [T] Signal transduction mechanisms 97 3.4
 [M] Cell wall/membrane/envelope biogenesis 130 4.6
 [N] Cell motility 9 0.3
 [Z] Cytoskeleton 0 0.0
 [W] Extracellular structures 0 0.0
 [U] Intracellular trafficking, secretion, and vesicular transport 23 0.8
 [O] Posttranslational modification, protein turnover, chaperones 57 2.0
Metabolism
 [C] Energy production and conversion 91 3.2
 [G] Carbohydrate transport and metabolism 339 12.0
 [E] Amino acid transport and metabolism 195 6.9
 [F] Nucleotide transport and metabolism 87 3.1
 [H] Coenzyme transport and metabolism 57 2.0
 [I] Lipid transport and metabolism 62 2.2
 [P] Inorganic ion transport and metabolism 103 3.6
 [Q] Secondary metabolites biosynthesis, transport and catabolism 27 1.0
Poorly characterized
 [R] General function prediction only 303 10.7
 [S] Function unknown 211 7.5