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Table 1 Presence and absence of major virulence factors in HP14039 complete genome and other hpNEAfrica draft genomes (“+” means presence and “” means absence)

From: The complete genome and methylome of Helicobacter pylori hpNEAfrica strain HP14039

Virulence factors HP14039 HP01234 HP07036 HP08058 HP08061 HP08074 HP11049 HP13005 HP13050 HP13068 HP15005 HP98490 HP99255
cag-PAI + + +a + +
vacA + + + + + + + + + + + + +
dupA + + +b
iceA + + + + + + + + + +
babA + + + + +b + +b +b +b +
babB + + + +b +b +b +
babC + +b +
sabA + + + + + + + + + + + + +
oipA + + + + + + + + + + + + +
alpA + + + + + + + + + + + + +
alpB + + + + + + + + + + + + +
hopZ + + + + + + + + + + + + +
napA + + + + + + + + + + + + +
tieA/hp0986
ctkA/jhp0940
  1. aAll cag-PAI elements are present, except cagA
  2. bTruncated gene