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Table 1 Species annotation of the top 10 gut flora with the largest abundance in each group at the phyla and species classification levels

From: The gut metagenomics and metabolomics signature in patients with inflammatory bowel disease

  Phylum name Relative abundance in healthy controls Relative abundance in IBD patients   Species name Relative abundance in healthy controls Relative abundance in IBD patients
Phylum Firmicutes 0.573439 0.498548 Species Uncultured bacterium 0.534105 0.446245
Proteobacteria 0.192233 0.273626 Uncultured organism 0.095377 0.102373
Bacteroidetes 0.19225 0.132276 Escherichia coli 0.036243 0.116567
Actinobacteria 0.027346 0.092594 Unidentified 0.017717 0.071877
Fusobacteria 0.008666 0.00015 Gut metagenome 0.078422 0.011995
Tenericutes 0.004209 3.39E-05 Klebsiella pneumoniae 0.016731 0.026042
Verrucomicrobia 0.000156 0.001754 Bacteroides ovatus V975 0.009631 0.023501
Epsilonbacteraeota 0.000686 0.000407 Bifidobacterium longum subsp. longum 0.005054 0.017934
Patescibacteria
Chloroflexi
0.000274
0.000164
0.000214
8.63E-05
Human gut metagenome 0.021813 0.006999
Uncultured Bacteroides sp. 0.001932 0.015503
  Others 0.000576 0.000311   Others 0.182975 0.160965