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Table 1 List of Primers used in the study

From: Butyrate driven raft disruption trots off enteric pathogen invasion: possible mechanism of colonization resistance

Gene (Accession number of the gene)

Primer sequence

Forward primer

Reverse primer

GAPDH (NM_008084.4)

5′-AGAGAGGCCCAGCTACTCG-3′ (Tm = 59.8)

5′GGCACTGCACAAGAAGATGC-3′ (Tm = 59.9)

MUC-2 (NM_023566.4)

5′-GCTGACGAGTGGTTGGTGAATG-3′ (Tm = 60.0)

5′- GATGAGGTGGCAGACAGGAGAC-3′ (Tm = 59.9)

IFN-γ (NM_008337.4)

5′-TCAAGTGGCATAGATGTGGAAGAA-3′ (Tm = 59.9)

5′-TGGCTCTGCAGGATTTTCATG-3′ (Tm = 59.9)

IL-10 (XM_036162094.1)

5′-GGTTGCCAAGCCTTATCGGA-3′ (Tm = 60.0)

5′-ACCTGCTCCACTGCCTTGCT-3′ (Tm = 59.9)

TNF-α (NM_001278601.1)

5′-CATCTTCTCAAAATTCGAGTGACAA-3′ (Tm = 60.1)

5′-TGGGAGTAGACAAGGTACAACCC-3′ (Tm = 60.2)

IL-6 (NM_001314054.1)

5′-GATAAGCTGGAGTCACAGAAGG-3′ (Tm = 59.3)

5′-TTGCCGAGTAGATCTCAAAGTG-3′ (Tm = 60.0)

IL-12 (NM_001303244.1)

5′-GGAAGCACGGCAGCAGAATA-3′ (Tm = 59.8)

5′-AACTTGAGGGAGAAGTAGGAATGG-3′ (Tm = 60.1)

Cathelicidin (NM_009921.2)

5′- GGCAGCTACCTGAGCAATGT-3′ (Tm59.6)

5′-CTGTGCACCAGGCTCGTTA-3′ (Tm = 59.8)