Table 8 Mutations associated with biofilm formation in UM171, UM626A1, and UM650B
Type | Locus tag (gene)/protein | Position | Type of variation | Bases change (amino acid change) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
UM171 | UM626A1 | UM650B | ||||||||||
S | B | R | S | B | R | S | B | R | ||||
SNV | K747_RS04025(hypE)/hydrogenase expression/formation protein HypE | NC_021215.3:820809 | Non-synonymous, exonic | C (G) | C>G (G145A) | C>G (G145A) | C (G) | C>G (G145A) | C>G (G145A) | C (G) | C>G (G145A) | C>G (G145A) |
NC_021215.3:821112 | Non-synonymous, exonic | T (H) | T>C (H44R) | T>C (H44R) | T (H) | T>C (H44R) | T>C (H44R) | T (H) | T>C (H44R) | T>C (H44R) | ||
NC_021215.3:821113 | Non-synonymous, exonic | G (H) | G>T (H44N) | G>T (H44N) | G (H) | G>T (H44N) | G>T (H44N) | G (H) | G>T (H44N) | G>T (H44N) | ||
K747_RS04030(hypF)/carbamoyltransferase HypF | NC_021215.3:822687 | Non-synonymous, exonic | C (A) | C>T (A271T) | C>T (A271T) | C (A) | C T (A271T) | C>T (A271T) | C (A) | C>T (A271T) | C>T (A271T) | |
NC_021215.3:822837 | Non-synonymous, exonic | C (D) | C>T (D221N) | C>T (D221N) | C (D) | C>T (D221N) | C>T (D221N) | C (D) | C>T (D221N) | C>T (D221N) | ||
K747_RS06380/Cag pathogenicity island protein | NC_021215.3:1300640 | Non-synonymous, exonic | T (K) | T>G (K608Q) | T>G (K608Q) | T (K) | T>G (K608Q) | T>G (K608Q) | T (K) | T>G (K608Q) | T>G (K608Q) | |
NC_021215.3:1300687 | Non-synonymous, exonic | C (S) | C>T (S592N) | C>T (S592N) | C (S) | C>T (S592N) | C>T (S592N) | C (S) | C>T (S592N) | C>T (S592N) | ||