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Table 1 Genomic nucleotide content and gene counts

From: Whole-genome sequence assembly of Pediococcus pentosaceus LI05 (CGMCC 7049) from the human gastrointestinal tract and comparative analysis with representative sequences from three food-borne strains

Attribute

Genome (total)

 

Value

% of totala

Size (bp)

1,751,578

 

G?+?C content (bp)

653,105

37.29

Coding region (bp)

1,457,159

83.19

Total genesb

1,638

 

RNA genes

53

3.24

Protein-coding genes

1,555

94.93

Genes assigned to COGs

1,321

84.95

Genes with signal peptides

29

1.86

Genes with transmembrane helices

492

31.64

  1. a)The total is based either on the size of the genome in base pairs or the total number of protein-coding genes in the annotated genome.
  2. b)Also includes 35 other genes.